Gene Information

Name : AM1_4053 (AM1_4053)
Accession : YP_001518350.1
Strain : Acaryochloris marina MBIC11017
Genome accession: NC_009925
Putative virulence/resistance : Resistance
Product : two-component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4095139 - 4095900 bp
Length : 762 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAACCCGGATACTTGTTATTGATGATGATCCTGCGATCGCAGAATTGGTTGCGATCAACCTGGAAATGGCAGGCTA
TGATGTAGCCCAAGCAACTGACGGGATTAAAGGGCAAGCGTTGGCCGTCCAGCTACTGCCAGATTTGATCATCTTGGACC
TAATGCTTCCCAAAGTGGATGGCTTTACCATCTGCCAACGATTACGGCGTGATCAGCGGACCGCCGATATTCCAATCCTG
ATGCTTACGGCTCTCAGCCAGACCCAGGATAAGGTCGAAGGATTTAATGCTGGAGCCGATGACTATCTCACCAAGCCCTT
TGAACTAGAGGAAATGCTGGCCCGGGTTCGTGCCCTGCTGCGACGAACCGATCGCATTCCGCAAGCGGCCCGCCATAGTG
AAATTCTCAGCTATGGCCCCCTGACCCTGGTGCCTGAGCGGTTTGAAGTGTTGTGGGTTGATAAAGTGATTAAGCTGACT
CGTTTAGAGTTTGAGCTGCTGCACTGCCTGCTTCAGCGTCATGGCCAAACCGTCTCGCCTAGCGAGATTCTCCAGGAAGT
TTGGGGCTATGATCCGAATGATGATATTGAAACCATTCGGGTGCATGTACGCCATTTGCGCACTAAGCTAGAGCCCGATC
CCCGTCATCCTCAGTACATCAAAACGGTCTATGGGGCGGGATATTGCCTAGAGCTGCCTCACACGGCAGAGGCAGAGAAT
GCTGAAGCCACGAATGAGGAAAACCAAGCTTCTGTTACCTAG

Protein sequence : 
MKTRILVIDDDPAIAELVAINLEMAGYDVAQATDGIKGQALAVQLLPDLIILDLMLPKVDGFTICQRLRRDQRTADIPIL
MLTALSQTQDKVEGFNAGADDYLTKPFELEEMLARVRALLRRTDRIPQAARHSEILSYGPLTLVPERFEVLWVDKVIKLT
RLEFELLHCLLQRHGQTVSPSEILQEVWGYDPNDDIETIRVHVRHLRTKLEPDPRHPQYIKTVYGAGYCLELPHTAEAEN
AEATNEENQASVT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 6e-28 42
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 4e-27 41
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AM1_4053 YP_001518350.1 two-component transcriptional regulator NC_002952.2859905.p0 Protein 6e-36 43
AM1_4053 YP_001518350.1 two-component transcriptional regulator NC_002745.1124361.p0 Protein 8e-36 43
AM1_4053 YP_001518350.1 two-component transcriptional regulator NC_009782.5559369.p0 Protein 8e-36 43
AM1_4053 YP_001518350.1 two-component transcriptional regulator NC_002951.3237708.p0 Protein 8e-36 43
AM1_4053 YP_001518350.1 two-component transcriptional regulator NC_003923.1003749.p0 Protein 7e-36 43
AM1_4053 YP_001518350.1 two-component transcriptional regulator NC_002758.1121668.p0 Protein 8e-36 43
AM1_4053 YP_001518350.1 two-component transcriptional regulator NC_009641.5332272.p0 Protein 8e-36 43
AM1_4053 YP_001518350.1 two-component transcriptional regulator NC_013450.8614421.p0 Protein 8e-36 43
AM1_4053 YP_001518350.1 two-component transcriptional regulator NC_007793.3914279.p0 Protein 8e-36 43
AM1_4053 YP_001518350.1 two-component transcriptional regulator NC_007622.3794472.p0 Protein 6e-36 43
AM1_4053 YP_001518350.1 two-component transcriptional regulator HE999704.1.gene2815. Protein 2e-35 43
AM1_4053 YP_001518350.1 two-component transcriptional regulator AF155139.2.orf0.gene Protein 2e-30 43
AM1_4053 YP_001518350.1 two-component transcriptional regulator AE000516.2.gene3505. Protein 4e-25 43
AM1_4053 YP_001518350.1 two-component transcriptional regulator AF310956.2.orf0.gene Protein 3e-28 42
AM1_4053 YP_001518350.1 two-component transcriptional regulator AE016830.1.gene2255. Protein 2e-27 41
AM1_4053 YP_001518350.1 two-component transcriptional regulator U35369.1.gene1.p01 Protein 2e-27 41
AM1_4053 YP_001518350.1 two-component transcriptional regulator BAC0308 Protein 6e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AM1_4053 YP_001518350.1 two-component transcriptional regulator VFG1390 Protein 8e-34 45
AM1_4053 YP_001518350.1 two-component transcriptional regulator VFG0596 Protein 2e-23 41