Gene Information

Name : AM1_3230 (AM1_3230)
Accession : YP_001517542.1
Strain : Acaryochloris marina MBIC11017
Genome accession: NC_009925
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3269958 - 3270671 bp
Length : 714 bp
Strand : -
Note : -

DNA sequence :
TTGAAAGATCAGCAGCAAAAAATTCTAGTCGCTGATGATGAAGCTAGCATTCGTCGGATCCTAGAAACTCGTCTCTCCAT
GATGGGGTTCGTTGTCATCACTGCCGCTGATGGCGAGGAAGCCCTGCAAGTGTTTCAGCATCAAGAACCAGATTTGATTA
TTTTGGATGTCATGATGCCCAAGCTGAACGGGTATCAGGTCTGCCAATCCCTACGGCAAGAATCAGATGTCCCCATCATT
ATGTTGACGGCTCTTTCAGACGTCGCCGATCGGATTACGGGTCTGGAAATGGGCGCAGACGACTATATGGTCAAGCCGTT
TTCTCCCAAAGAACTAGAGTCACGCATTCGCTGTATTCTTCGACGGATTACAAAATCCCACTCTTCTCACCATAAATCAG
CCGGAGTGATTCAGGTCGGCCATCTAGAAATTGATACCAATAAACGCCAAGTCTATAAAGATAAAGAACGCATTCAGCTC
ACTCATCTCGAATTTAATCTACTAGAGCTGCTGGTTAGCCGCCCCGGAGAACCCATCTCTAGAGTTGAATTTTTACAAAA
GGTTTGGGGCTATAGCCCTGACGGCAAGATTGATACCCGTGTCGTCGATGTTCATATGTCGCGCCTCCGGAACAAGCTGA
AAGAAGATACGGAAGAACCCGACTTGATCTTGTCTGTACGAGGCGTAGGCTATGCCATCCAACGGGGTGATTAA

Protein sequence :
MKDQQQKILVADDEASIRRILETRLSMMGFVVITAADGEEALQVFQHQEPDLIILDVMMPKLNGYQVCQSLRQESDVPII
MLTALSDVADRITGLEMGADDYMVKPFSPKELESRIRCILRRITKSHSSHHKSAGVIQVGHLEIDTNKRQVYKDKERIQL
THLEFNLLELLVSRPGEPISRVEFLQKVWGYSPDGKIDTRVVDVHMSRLRNKLKEDTEEPDLILSVRGVGYAIQRGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AM1_3230 YP_001517542.1 two component transcriptional regulator NC_002952.2859905.p0 Protein 8e-42 47
AM1_3230 YP_001517542.1 two component transcriptional regulator NC_002745.1124361.p0 Protein 1e-41 47
AM1_3230 YP_001517542.1 two component transcriptional regulator NC_009782.5559369.p0 Protein 1e-41 47
AM1_3230 YP_001517542.1 two component transcriptional regulator NC_002951.3237708.p0 Protein 1e-41 47
AM1_3230 YP_001517542.1 two component transcriptional regulator NC_003923.1003749.p0 Protein 1e-41 47
AM1_3230 YP_001517542.1 two component transcriptional regulator NC_002758.1121668.p0 Protein 1e-41 47
AM1_3230 YP_001517542.1 two component transcriptional regulator NC_007622.3794472.p0 Protein 7e-42 47
AM1_3230 YP_001517542.1 two component transcriptional regulator NC_009641.5332272.p0 Protein 1e-41 47
AM1_3230 YP_001517542.1 two component transcriptional regulator NC_013450.8614421.p0 Protein 1e-41 47
AM1_3230 YP_001517542.1 two component transcriptional regulator NC_007793.3914279.p0 Protein 1e-41 47
AM1_3230 YP_001517542.1 two component transcriptional regulator BAC0125 Protein 2e-34 44
AM1_3230 YP_001517542.1 two component transcriptional regulator HE999704.1.gene2815. Protein 5e-37 44
AM1_3230 YP_001517542.1 two component transcriptional regulator NC_012469.1.7685629. Protein 3e-36 43
AM1_3230 YP_001517542.1 two component transcriptional regulator AE000516.2.gene3505. Protein 7e-36 43
AM1_3230 YP_001517542.1 two component transcriptional regulator BAC0083 Protein 2e-28 42
AM1_3230 YP_001517542.1 two component transcriptional regulator BAC0638 Protein 1e-27 42
AM1_3230 YP_001517542.1 two component transcriptional regulator NC_007622.3794948.p0 Protein 4e-30 41
AM1_3230 YP_001517542.1 two component transcriptional regulator NC_003923.1003417.p0 Protein 4e-30 41
AM1_3230 YP_001517542.1 two component transcriptional regulator NC_013450.8614146.p0 Protein 4e-30 41
AM1_3230 YP_001517542.1 two component transcriptional regulator NC_002951.3238224.p0 Protein 4e-30 41
AM1_3230 YP_001517542.1 two component transcriptional regulator NC_007793.3914065.p0 Protein 4e-30 41
AM1_3230 YP_001517542.1 two component transcriptional regulator NC_002758.1121390.p0 Protein 4e-30 41
AM1_3230 YP_001517542.1 two component transcriptional regulator NC_010079.5776364.p0 Protein 4e-30 41
AM1_3230 YP_001517542.1 two component transcriptional regulator NC_002952.2859858.p0 Protein 4e-30 41
AM1_3230 YP_001517542.1 two component transcriptional regulator AF155139.2.orf0.gene Protein 1e-33 41
AM1_3230 YP_001517542.1 two component transcriptional regulator FJ349556.1.orf0.gene Protein 9e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AM1_3230 YP_001517542.1 two component transcriptional regulator VFG1389 Protein 1e-28 44
AM1_3230 YP_001517542.1 two component transcriptional regulator VFG0596 Protein 2e-27 41
AM1_3230 YP_001517542.1 two component transcriptional regulator VFG1390 Protein 3e-33 41