Gene Information

Name : thiC (AM1_3002)
Accession : YP_001517314.1
Strain : Acaryochloris marina MBIC11017
Genome accession: NC_009925
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 3031210 - 3032586 bp
Length : 1377 bp
Strand : -
Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine

DNA sequence :
ATGCGTCATCAATGGGTTGCTAACCGTCGCGGACAGAGCAATGTCAGTCAGATGCACTATGCGCGACAGGGCCAAATCAC
GGAAGAAATGGACTATGTTGCCAAACGTGAGAATCTTCCAGCTGATTTGATTCGAGAAGAAGTGGCTCGGGGACGGATGA
TCATTCCGGCCAACGTGAATCACGTTAATTTGGAACCGATGGCCATTGGTATTGCGTCCAAATGTAAGGTGAATGCCAAT
ATTGGTGCTTCTCCTAACTCGTCCAATATTGAAGAAGAACTCGACAAGCTCCGCTTAGCGGTCAAGTACGGAGCCGATAC
GGTTATGGATTTGTCGACAGGCGGCGGCAATTTAGATGAAATTCGCACTGCCATTATCAATGAATCTTCAGTACCCATTG
GCACAGTGCCTATTTATCAAGCTCTAGAAAGTGTGCATGGCAACATTGAGAATCTAACGGCTGATGACTTTTTGCACATC
ATTGACAAGCATGCCCAGCAAGGAGTGGACTACCAAACCATTCATGCTGGCATTTTGATTGAGCATTTGCCCTTGGTGCG
CGATCGCATCACTGGTATCGTCTCCCGTGGCGGAGGTATTCTGGCCCGCTGGATGCTGCATCATCATAAGCAAAATCCAC
TGTATACCCGCTTCAATGACGTTATCGAAATCTTCAAAAAGCATGATGTGTCTTTTAGCTTGGGCGATTCCCTACGCCCT
GGCTGTACCCACGATGCCTCTGATGATGCCCAGCTGGCAGAGCTGAAGACCTTAGGACAACTCACCCGCCGAGCTTGGGA
ACATGATGTTCAGGTGATGGTGGAAGGTCCAGGTCATGTGCCCATGGACCAAATTGAATTCAATGTTCGCAAGCAAATGG
AGGAATGCTCGGAAGCACCTTTCTATGTGTTGGGACCATTGGTCACTGATATTGCGCCAGGGTATGACCACATTACGTCT
GCGATTGGGGCCGCGATGGCAGGTTGGTATGGCACCGCCATGCTTTGCTATGTGACTCCTAAAGAACATCTAGGCCTGCC
GGATGCAGAGGATGTGCGCAATGGCCTCATTGCTTATAAGATTGCTGCCCATGCCGCAGATATTGCTCGCCATCGTCCGG
GGGCTCGCGATCGAGATGATCAGCTTTCAGAAGCCCGCTATAACTTCGACTGGAATCGTCAGTTTGAGCTGTCCCTCGAT
CCGGAGCGGGCTCGTGAATACCACGATGAGACGCTACCCGCCGATATCTACAAGACGGCCGAATTCTGCTCCATGTGTGG
ACCGAAGTTCTGCCCCATGCAAACCAAGGTCGATGCGGATGCCTTAACTGAACTGGAGAAGTTCTTAGCTAAGGATCAAG
TGGGTTCTGCCCGTTAG

Protein sequence :
MRHQWVANRRGQSNVSQMHYARQGQITEEMDYVAKRENLPADLIREEVARGRMIIPANVNHVNLEPMAIGIASKCKVNAN
IGASPNSSNIEEELDKLRLAVKYGADTVMDLSTGGGNLDEIRTAIINESSVPIGTVPIYQALESVHGNIENLTADDFLHI
IDKHAQQGVDYQTIHAGILIEHLPLVRDRITGIVSRGGGILARWMLHHHKQNPLYTRFNDVIEIFKKHDVSFSLGDSLRP
GCTHDASDDAQLAELKTLGQLTRRAWEHDVQVMVEGPGHVPMDQIEFNVRKQMEECSEAPFYVLGPLVTDIAPGYDHITS
AIGAAMAGWYGTAMLCYVTPKEHLGLPDAEDVRNGLIAYKIAAHAADIARHRPGARDRDDQLSEARYNFDWNRQFELSLD
PERAREYHDETLPADIYKTAEFCSMCGPKFCPMQTKVDADALTELEKFLAKDQVGSAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 2e-123 61
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 2e-123 61
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 1e-118 56