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Name : clpC (AM1_1947) Accession : YP_001516278.1 Strain : Acaryochloris marina MBIC11017 Genome accession: NC_009925 Putative virulence/resistance : Virulence Product : ATP-dependent protease, ATP-binding subunit ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1941548 - 1944016 bp Length : 2469 bp Strand : + Note : - DNA sequence : ATGTTTGAACGCTTTACAGAAAAAGCCATTAAAGTCATCATGCTGGCTCAAGAGGAAGCCCGCCGCTTGGGGCACAATTT TGTCGGCACAGAGCAAATTCTTTTGGGGCTCATTGGAGAAGGAACTGGCGTTGCCGCCAAAGTTTTGAAATCCATGGGGG TTAACCTTAAAGATGCTCGCGTTGAAGTAGAAAAAATTATCGGTCGCGGTTCTGGATTTGTTGCGGTAGAGATTCCCTTT ACCCCCAGAGCCAAGCGCGTTCTCGAGTTGTCGTTAGAAGAGGCCCGTCAGCTGGGTCACAACTACATTGGCACGGAGCA CTTGCTGTTAGGACTCATCCGTGAGGGTGAAGGGGTCGCCGCCCGTGTTCTAGAAAATCTTGGAGTTGACCTGGCTAAGG TACGCACCCAAGTCATCCGCATGTTGGGTGAAACAGCAGAAGTCTCTGCTGGCGGTGGTCAAGGACGTACTAAGACCCCA ACCTTAGATGAGTTTGGCGCCAACCTGACCAACCTTGCCTCTGAAGGCAAGCTAGACCCCGTTGTGGGACGCCAAAAAGA AATTGAGCGGGTGATTCAGATTCTCGGTCGTCGGACGAAGAACAATCCAGTCTTGATTGGTGAACCGGGCGTGGGTAAAA CTGCGATCGCAGAAGGTCTCGCCCAGCGGATCGCCAATGGAGATATCCCCGACATCCTAGAAGAGAAGCGCGTGGTCACC TTGGATATTGGTCTGCTGGTTGCCGGTACCAAATATCGAGGGGAATTCGAAGAGCGTCTCAAGAAAATCATGGATGAGAT TCGCCAAGCCTCCAACGTGATTTTGGTGATTGACGAAGTTCATACCCTGATTGGTGCAGGGGCTGCTGAAGGGGCTATTG ATGCTGCGAATATCCTCAAGCCTGCGTTGGCTCGGGGTGAACTCCAGTGCATCGGTGCCACCACTTTAGATGAGTATCGC AAGCATATCGAGCGAGATGCCGCCCTGGAACGTCGTTTCCAGCCGGTGATGGTGGGTGAGCCTTCTGTGGAAGAAACCAT CGAAATTCTTTACGGCTTGCGCGAGCGCTATGAGCAGCACCATAAACTCAGCATTTTGGATGAGTCTTTAGAAGCGGCAG CCAAGCTTTCGGATCGCTATATCTCCGACCGCTATCTGCCTGACAAGGCCATTGACCTGATTGATGAAGCTGGTTCTAGA GTTCGGTTAATTAACTCTCAACTTCCCCCAGCAGCCAAAGAATTGGACAAGGAACTACGCAAAGTTCTTAAAGATAAGGA TGATGCCGTTCGCTCCCAAGACTTTGACAAAGCCGGTGAACTGCGCGACCGCGAGATGGAAATCAAATCCGAGATCAAAG CGATCGCTCAGAACAAAAAGTCGAGCGAGGAGAACAAGGACGATTCCCCCAAGGTGACGGAAGAGGATATTGCCCATATT GTGGCTTCCTGGACCGGGGTTCCCGTCAGCAAGCTGACGGAATCTGAGTCTGAGAAGCTGCTGCATATGGAAGATACCCT ACACCAGCGATTGATCGGTCAGGATGAAGCGGTTCGTGCCATCTCTCGAGCGATTCGCCGGGCCCGTGTGGGTCTCAAGA ATCCTAACCGTCCGATTGCTAGCTTTATTTTCTCTGGTCCAACTGGAGTCGGTAAGACTGAGCTGACCAAGGCTCTGGCC ACTTACTTCTTTGGCTCCGAAGAAGCCATGATTCGCTTGGATATGTCCGAGTATATGGAGCGACACACGGTCTCCAAGTT GATTGGCTCGCCGCCTGGCTACGTGGGCTATAACGAAGGCGGTCAGCTAACCGAGGCAGTTCGTCGACGTCCTTACACTG TGGTCCTCTTCGACGAAATCGAAAAGGCTCACCCCGACGTCTTCAATATGCTGCTGCAAATTCTGGAAGATGGTCGCTTA ACCGACGCCAAAGGACGAACCGTCGACTTCAAGAACACCCTGTTGATCATGACCTCAAATATTGGGTCGAAGGTGATTGA AAAGGGTGGCGGCGGCCTCGGCTTTGAATTTGCTGAGGACGAAGCGGATTCTCAATACAATCGCATCCGCTCCTTGGTCA ACGAAGAGCTGAAGGGCTATTTCCGACCGGAATTCTTAAACCGACTCGACGAAATCATCGTCTTCCGTCAGCTCACTAAG GATGAAGTGAAGGAAATTTCCGAACTATTACTGAAGGAAGTCTTCAGTCGTTTGGAAGAGAAAAGCATCACCTTGAATAT CACTGATCGCTTTAAGGAGCGATTGGTGGAAGAGGGCTACAATCCCAGTTATGGGGCTCGTCCCTTACGTCGAGCCATTA TGCGTCTGCTCGAGGACACCTTGGCCGAAGAGATTCTCTCTGGTCGGGTGAAGGAAGGCGACACGGCCATTGTTGATGTA GACGAAGATCAGCAAGTTAAGATTGCCTCGGCTGAAAAACGGGAACTGCTGCCGCAAGCTGCAGAGTAA Protein sequence : MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFVAVEIPF TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGETAEVSAGGGQGRTKTP TLDEFGANLTNLASEGKLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANGDIPDILEEKRVVT LDIGLLVAGTKYRGEFEERLKKIMDEIRQASNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYR KHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHHKLSILDESLEAAAKLSDRYISDRYLPDKAIDLIDEAGSR VRLINSQLPPAAKELDKELRKVLKDKDDAVRSQDFDKAGELRDREMEIKSEIKAIAQNKKSSEENKDDSPKVTEEDIAHI VASWTGVPVSKLTESESEKLLHMEDTLHQRLIGQDEAVRAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALA TYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRL TDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFAEDEADSQYNRIRSLVNEELKGYFRPEFLNRLDEIIVFRQLTK DEVKEISELLLKEVFSRLEEKSITLNITDRFKERLVEEGYNPSYGARPLRRAIMRLLEDTLAEEILSGRVKEGDTAIVDV DEDQQVKIASAEKRELLPQAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_001516278.1 | ATP-dependent protease, ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 61 |
| clpC | YP_001516278.1 | ATP-dependent protease, ATP-binding subunit ClpC | VFG0080 | Protein | 3e-150 | 52 |
