Gene Information

Name : Clos_0734 (Clos_0734)
Accession : YP_001512287.1
Strain : Alkaliphilus oremlandii OhILAs
Genome accession: NC_009922
Putative virulence/resistance : Unknown
Product : IstB ATP binding domain-containing protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 810849 - 811568 bp
Length : 720 bp
Strand : -
Note : PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: swo:Swol_2219 hypothetical protein

DNA sequence :
ATGAAGGAGTTAATTATGGACTATTGTAAGCAGCTTAGATTAGGTGGTCATATAGCCAATAATTATGAAAACATTAAAGC
AAATACCTACGAAGAGTTTTTAGTAAAAGTATTAGAAATTGCCGTCCAAAATAGAGAAGTGGTCAAGAAAAATCGCTCTA
TACAACAAGCAAAATTTGATGTATTAAAAACCTTTGAAGGCTACGAATTTAATGATATTCAAATTCCATCAGGAACTACA
GTAGATGAGATTAAAAGCGTAAGTTTCATCGATAAAAAAGAGAATTTAATTTTGTACGGTCCCGTAGGGACGGGTAAGAC
CCACCTTGCCACTGCCGTGGGGCTTGAGGCCATTAATCGTGGCAAGAAAGTAAAGTTTTTTAGAACTGCAAGCCTTGTAA
ATCAACTAATTGAGGCTAAAGAAGATGGCAGCTTAAATAAGTTTTTTAAGCAACTAGATAAGCTAGATTTACTGATATGT
GACGAATGGGGATATATCCCTTTAGATATAGATGGTTGCCAGCTCTTATTTCAAGTAATAGCAGACTGTTATGAGAAAAG
AAGTGTCATAATTACAACAAATCTTGAATTCAGTAAGTGGAATAATATTTTTTACAACGAGCGTCTAACAAGTGCTATTA
TAGATAGACTGGTGCATCACAGCCATCTATTGTTATTCACAGGTAAAAGCTATCGCTTACTGAACTCAAGTATAAAATAA

Protein sequence :
MKELIMDYCKQLRLGGHIANNYENIKANTYEEFLVKVLEIAVQNREVVKKNRSIQQAKFDVLKTFEGYEFNDIQIPSGTT
VDEIKSVSFIDKKENLILYGPVGTGKTHLATAVGLEAINRGKKVKFFRTASLVNQLIEAKEDGSLNKFFKQLDKLDLLIC
DEWGYIPLDIDGCQLLFQVIADCYEKRSVIITTNLEFSKWNNIFYNERLTSAIIDRLVHHSHLLLFTGKSYRLLNSSIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 4e-28 43
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 6e-32 41
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 6e-32 41
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 9e-32 41
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 6e-32 41
unnamed CAA21402.1 - Not tested HPI Protein 9e-32 41
api84 CAF28558.1 putative transposase Not tested YAPI Protein 6e-32 41
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 6e-32 41
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 6e-32 41
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 6e-32 41
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 8e-32 41
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 8e-32 41
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 6e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clos_0734 YP_001512287.1 IstB ATP binding domain-containing protein VFG1460 Protein 2e-28 43
Clos_0734 YP_001512287.1 IstB ATP binding domain-containing protein VFG1606 Protein 4e-32 41
Clos_0734 YP_001512287.1 IstB ATP binding domain-containing protein VFG1515 Protein 4e-32 41
Clos_0734 YP_001512287.1 IstB ATP binding domain-containing protein VFG1663 Protein 4e-32 41
Clos_0734 YP_001512287.1 IstB ATP binding domain-containing protein VFG1627 Protein 4e-32 41