Gene Information

Name : Clos_0729 (Clos_0729)
Accession : YP_001512283.1
Strain : Alkaliphilus oremlandii OhILAs
Genome accession: NC_009922
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 805078 - 805758 bp
Length : 681 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: oih:OB0359 ABC transporter ATP-binding protein

DNA sequence : 
ATGGAAATATTAAGGATTGAAGATTTAACAAAAATATATGGTGATGGTGAGAATAAAGTAAGTGCATTAGATGGTATTAA
TCTAAAAGTAAAAAGAGGGGAGTTTATTGCTGTTATTGGACCTAGTGGATCTGGTAAGTCTACATTACTTCACTTAATAG
GTGGAGTAGATACACCAACAAAGGGAAAAATTTATATAGATGGAACAGATATTTCGAAATACTCTTCAAAAGAATTAGCC
TTATTTCGTAGGAGAAAGGTGGGGCTTATTTATCAATTTTATAATCTAATTCCTAATATAACAGTAAAACATAATATTGA
GCTGCCATTAAAGCTAGATAAGCGTTCAGTAGATAAATCATTTATGGGTAATATAATCTCTAAACTTGGAATAGAATCGA
AACTAAATAGTTTTCCAAATGAACTTTCAGGAGGACAACAGCAGAGAGTTGCCATAGCTAGAAGTCTTATATATAGTCCA
TCTATAGTACTAGCAGATGAACCTACTGGAAATTTGGATAGAAAGAACTCTCAGGAGATAATAGATATTTTAAAATATTT
TAATTATACTTTAAAACAAACTATAATAGTTATTACCCATGATGAAAATGTAGCATTACAGGCAGATAGAGTAATAACTA
TTATAGATGGTAAAGTTGTAGGAGATGAATTAAATGAATAA

Protein sequence : 
MEILRIEDLTKIYGDGENKVSALDGINLKVKRGEFIAVIGPSGSGKSTLLHLIGGVDTPTKGKIYIDGTDISKYSSKELA
LFRRRKVGLIYQFYNLIPNITVKHNIELPLKLDKRSVDKSFMGNIISKLGIESKLNSFPNELSGGQQQRVAIARSLIYSP
SIVLADEPTGNLDRKNSQEIIDILKYFNYTLKQTIIVITHDENVALQADRVITIIDGKVVGDELNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 44
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 9e-28 43
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-27 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-35 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clos_0729 YP_001512283.1 ABC transporter CP001581.1.gene598.p Protein 1e-53 52
Clos_0729 YP_001512283.1 ABC transporter CP001581.1.gene798.p Protein 4e-48 49
Clos_0729 YP_001512283.1 ABC transporter NC_012469.1.7685735. Protein 6e-38 41