|
Name : Clos_0611 (Clos_0611) Accession : YP_001512167.1 Strain : Alkaliphilus oremlandii OhILAs Genome accession: NC_009922 Putative virulence/resistance : Unknown Product : two component transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 676345 - 677046 bp Length : 702 bp Strand : + Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: lwe:lwe2627 DNA-binding response regulator DNA sequence : ATGGAAAATAAACCTGTTATTATGATCGTAGAGGATGAAGAACCAATCAGTGAATTCATCTCTATAAAGTTAGAGTTACA AGGATACAGAACGCTGAAAGCCTACAACGGGCAGGAAGCAATGTCCCTTGCTGCTTCCCATTGCCCAGATTTAATTTTAA TGGATTTGGGACTGCCAGATAAAGATGGGATGGAAGTGTTGAAATTCATTCGAGGGTGGAGCTTGGTGCCCATCATTATT ATATCTGCAAGACACGAGGAAAAGTTTATCGTATCAGCCCTTGATAATGGTGCAGACGATTATATAACGAAACCTTTTAA CAACGCGATTTTAGTTGCAAGGGTCAGAACGGCTCTGCGAAGGGGGCATATTGCAAAAATTAAAAATAGCAATATGAATA AATCCTTTTCCTTAGACGACCTCTATATTGATTATGATAAGCGAATTGTGACAGTAGCCGGAAACCCAGTCCATTTGACG CCGATTGAATATCGGATCATTGTTTTGCTTTCTCTGAATGCAGGGACTGTAGTGACCCATGAGTTTTTAAGTCGTGAGCT TTGGGGTCCCTATGTGAATAAAAGCAAAGCCCTTCGGGTCAACGTTGCAAACCTACGGAGGAAAATTGAAAAGAACACTG CAGAGCCTCAATATATTTTGACAGAAATGGGTGTAGGCTACAGGATGTTAGAGGAAAAATAG Protein sequence : MENKPVIMIVEDEEPISEFISIKLELQGYRTLKAYNGQEAMSLAASHCPDLILMDLGLPDKDGMEVLKFIRGWSLVPIII ISARHEEKFIVSALDNGADDYITKPFNNAILVARVRTALRRGHIAKIKNSNMNKSFSLDDLYIDYDKRIVTVAGNPVHLT PIEYRIIVLLSLNAGTVVTHEFLSRELWGPYVNKSKALRVNVANLRRKIEKNTAEPQYILTEMGVGYRMLEEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0571 | NP_814337.1 | DNA-binding response regulator | Not tested | Not named | Protein | 4e-43 | 44 |
| ef0091 | AAM75294.1 | EF0091 | Not tested | Not named | Protein | 3e-43 | 44 |
| kdpE | YP_039536.1 | response regulator protein | Not tested | Type-II SCCmec | Protein | 2e-33 | 41 |
| kdpE | NP_370594.1 | transcriptional regulator kdpE | Not tested | Type-II SCCmec | Protein | 2e-33 | 41 |
| kdpE | NP_373306.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 2e-33 | 41 |
| kdeP | YP_190033.1 | DNA-binding response regulator KdeP | Not tested | Type-II SCCmec | Protein | 2e-33 | 41 |
| SH0031 | YP_251946.1 | hypothetical protein | Not tested | SCCmec | Protein | 7e-34 | 41 |
| kdpE | BAA82188.1 | KDP operon transcriptional regulatory protein KdpE | Not tested | Type-II SCCmec | Protein | 1e-33 | 41 |
