|
Name : Clos_0479 (Clos_0479) Accession : YP_001512037.1 Strain : Alkaliphilus oremlandii OhILAs Genome accession: NC_009922 Putative virulence/resistance : Unknown Product : NusG antitermination factor Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 542997 - 543515 bp Length : 519 bp Strand : + Note : KEGG: cno:NT01CX_1102 transcription termination/antitermination factor NusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides Ouz DNA sequence : ATGTCCGAAAAAGCAAGATGGTATGTAATGCATACTTATTCTGGTCATGAAAACAAAGTAAAGATGAACATTGAAAAGAT GGTTGAAAACAGAGGAATGGAAGATATTATCTTAGAAGTAAAAGTGCCGACAGAAGAGAAGATTGAAATTAAAAATGGCA AAAAAAAGGTAAAAGAATCCAAATTATTCCCAGGATATGTTCTAGTAAAAATGTTTATGACGGATGAATCTTGGTATTTA GTAAGAAATACAAGAGGTGTTACTGGTTTTGTTGGGCCAAGCTCAAAGCCAATACCACTGACAGATCAAGAAATAAAGTC TATGGGAGTAGAAGAGCCTAGAATAGAAATTGACGTTAAAGTTGGAGAAAGCATTAAGGTTATTTCTGGTCCTTTTGAAA CATTTATTGGAACAATTGATCATATCAATCTTGAAAAACAAACCTTAAAGGTTCGTATTTCAATGTTTGGAAGAGAAACG CCTGTTGAACTTGAATTTGATCAAATAGAAAAAATTTAA Protein sequence : MSEKARWYVMHTYSGHENKVKMNIEKMVENRGMEDIILEVKVPTEEKIEIKNGKKKVKESKLFPGYVLVKMFMTDESWYL VRNTRGVTGFVGPSSKPIPLTDQEIKSMGVEEPRIEIDVKVGESIKVISGPFETFIGTIDHINLEKQTLKVRISMFGRET PVELEFDQIEKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nusG | YP_006310753.1 | transcription antitermination protein NusG | Not tested | FWisland_4 | Protein | 2e-28 | 46 |
| nusG | YP_281502.1 | transcription antitermination protein NusG | Not tested | Not named | Protein | 7e-24 | 43 |
| BJAB07104_00341 | YP_008207806.1 | Transcription antiterminator | Not tested | AbaR25 | Protein | 1e-24 | 41 |
| BJAB0868_00345 | YP_008211671.1 | Transcription antiterminator | Not tested | AbaR26 | Protein | 1e-24 | 41 |
