Gene Information

Name : Clos_0036 (Clos_0036)
Accession : YP_001511602.1
Strain : Alkaliphilus oremlandii OhILAs
Genome accession: NC_009922
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 40093 - 40506 bp
Length : 414 bp
Strand : +
Note : TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: amt:Amet_0033 single-strand binding protein

DNA sequence :
ATGAATCGAGTAATTTTAATCGGACGTCTTGCTAGGGATCCAGAATTACGTTTTACTGCAAGCGGAAAAGCCGTTGCCAC
CTTTAGTATAGCAGTAAATAGACCTTTTTCAAAAGAAAAGGAAGCAGACTTTTTCAACATAGTTGTATGGGGAAAAAGTG
CTGAGAACTGCGCAAACTACCTGTCAAAGGGTAGATTGGTAGGTCTTGAAGGTAGACTTCAGAGCAGATCTTATGAAACG
CAAACTGGAGAAAAGCGATATATTACAGAAGTTATTGCTGACCAGGTGGAATTCTTAGAGTGGGGGAACAAAGAAGGACA
AACTCCAACTAGAAGAAACGATGATTTTGGATCTGTAGATATAGATATTAGCGAATTCCAAGCCATGGATGACGACGAAG
ACATCCCATTCTAG

Protein sequence :
MNRVILIGRLARDPELRFTASGKAVATFSIAVNRPFSKEKEADFFNIVVWGKSAENCANYLSKGRLVGLEGRLQSRSYET
QTGEKRYITEVIADQVEFLEWGNKEGQTPTRRNDDFGSVDIDISEFQAMDDDEDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 1e-24 59
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 1e-25 58
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 5e-24 58
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 8e-26 57
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 1e-25 57
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-26 56
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 4e-20 53