Gene Information

Name : Clos_0312 (Clos_0312)
Accession : YP_001511871.1
Strain : Alkaliphilus oremlandii OhILAs
Genome accession: NC_009922
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 365650 - 366462 bp
Length : 813 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cno:NT01CX_1448 ferric enterobactin transport ATP-binding protein FepC

DNA sequence : 
ATGATCGAAGCAAAAAATCTATGTATTGGATATGAAGAGCGTATCGTGGTCCATAACTTTTCCTTTCATATCGGTGAAGG
AGAGATGGTGTCCATTATAGGGCCCAACGGCTCTGGAAAATCCACCATATTGAAGGCAGTATCTCGACTTTTAAAACAAA
AAAGCGGCGCCATCTACTTGGAAAAAGAAGATATGAGCGCCATGAATATAAAGAAGATTGCAAAGAAAATGTCGGCGCTA
TCGCAACATAATAGAAGCCCAGAGGATATCAAAGTAAAGGAACTGATTTACTACGGTAGATTGCCTCATAAGAAATGGCA
CGAGAGAAGAAACGAAGAAGACGAGGAAATCATCCAGTGGGCGATGGACCAAACCTCCCTCAATGGGTATGAAGACAAGC
TGGTGATGGCCCTATCTGGCGGAGAGCGTCAACGAGTGTGGATCGCCATGGCTTTAGCACAACAACCTAGAATCCTCCTA
CTGGATGAACCAACCACGTACTTGGATATCTGTCATCAGCTAGAAGTCATGGAGCTTGTGAAGAAACTGAACCGAGAGCT
GAACTTGACGGTGATTATGGTACTCCACGATCTAGGTCAAGCTGCAAAGTACAGTCATCGAGTCGTTGTATTAAAAAAGG
GAAATTTAATCGCTGAAGGAAACCCCTACGATGTGTTGACGGAGGAATTGATCAAGGAAGTATACCAGGTAGAGGTCTGT
ATTCGAAAGGACATTTTAAAGGGAGAAGTGATCATTCATCCCATGGGGGTTTGCAAAAACTGTGAAGAGGGGTGCAAAAA
TGACAAAGTTTGA

Protein sequence : 
MIEAKNLCIGYEERIVVHNFSFHIGEGEMVSIIGPNGSGKSTILKAVSRLLKQKSGAIYLEKEDMSAMNIKKIAKKMSAL
SQHNRSPEDIKVKELIYYGRLPHKKWHERRNEEDEEIIQWAMDQTSLNGYEDKLVMALSGGERQRVWIAMALAQQPRILL
LDEPTTYLDICHQLEVMELVKKLNRELNLTVIMVLHDLGQAAKYSHRVVVLKKGNLIAEGNPYDVLTEELIKEVYQVEVC
IRKDILKGEVIIHPMGVCKNCEEGCKNDKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-43 41
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 3e-46 41
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 3e-46 41
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 8e-41 41
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-51 41
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-51 41
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 6e-51 41
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-51 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clos_0312 YP_001511871.1 ABC transporter BAC0164 Protein 1e-43 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clos_0312 YP_001511871.1 ABC transporter VFG0925 Protein 9e-46 42
Clos_0312 YP_001511871.1 ABC transporter VFG1042 Protein 1e-43 41