Gene Information

Name : Clos_2861 (Clos_2861)
Accession : YP_001514386.1
Strain : Alkaliphilus oremlandii OhILAs
Genome accession: NC_009922
Putative virulence/resistance : Resistance
Product : VanW family protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2720
EC number : -
Position : 3108331 - 3109146 bp
Length : 816 bp
Strand : -
Note : PFAM: VanW family protein; KEGG: efa:EF2296 vancomycin B-type resistance protein VanW

DNA sequence : 
ATGAGAACAAAACGATTAACGGAGAGATTTCCTTACCTCTTACCCATAAGAAAACTTCAGAGGAAGGTTTTCTTTTATAT
CGGTATGAAGCTGGATGCCAATCAATATGCGACTAAAAAGGCTCATAACATATTAGAACATCAAGTTTTTACAACAAAAT
CAAAGATGGTAAATACGGAAAGTGGCTATGACATTCAATATCAGCTCAATAAGGTGGACAACCTGAAGTTGGTTGCTAAA
ACCATTCATAAAGTTATCATAGAGCCCAATGAAACTTTTTCTTTCTGGATGCTGGCGAAAAATGCAGAGAAATATGGAAA
ATATAAAAAGGGATTGGCTATGGTGAACAATGAAATCACTTCCGTTGAAGGTGGTGGCCTTTGTCAAATCAGTAATTTAT
TATTTTGGGTATTCCTCCATACACCTCTTACTGTAGTGGAAAGAAACCCTCATTCAGCAGAAACCATACCCCAGCCTAAG
GGGGATATACCCGTTGGAGTTGATGCTACGATTGCAGAAGGTTGGTTGGATTTGAAAGTAAAAAATGAAACGGAAGAAAC
CTTTCAAGTTTTAGTTGAATTTGATGAAGATTTTATACATGGAACCATTGTAAGTAACAAACCTCAAGACGTTCTATATA
CTGTTGAGAGTGAAAATTTAAGATATGCAAGGGAAAATGGAAAAATCTATCGATATAATGAAATATATAAAGTTGGGTAT
GGGCAATTTAACGGAGAAATCGTTTCTAAGGAACTGGTTCTAAACAATAAATATGAAATTCGATACGATATCGAGTCAGA
AATAGGCCCGATTTAA

Protein sequence : 
MRTKRLTERFPYLLPIRKLQRKVFFYIGMKLDANQYATKKAHNILEHQVFTTKSKMVNTESGYDIQYQLNKVDNLKLVAK
TIHKVIIEPNETFSFWMLAKNAEKYGKYKKGLAMVNNEITSVEGGGLCQISNLLFWVFLHTPLTVVERNPHSAETIPQPK
GDIPVGVDATIAEGWLDLKVKNETEETFQVLVEFDEDFIHGTIVSNKPQDVLYTVESENLRYARENGKIYRYNEIYKVGY
GQFNGEIVSKELVLNNKYEIRYDIESEIGPI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanWB YP_008394257.1 vancomycin B-type resistance protein VanW Not tested Not named Protein 8e-63 45
vanW NP_815953.1 vancomycin B-type resistance protein VanW Not tested Not named Protein 4e-62 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clos_2861 YP_001514386.1 VanW family protein DQ212986.1.gene7.p01 Protein 3e-67 50
Clos_2861 YP_001514386.1 VanW family protein U35369.1.gene4.p01 Protein 2e-62 45
Clos_2861 YP_001514386.1 VanW family protein AF310956.2.orf3.gene Protein 4e-63 45
Clos_2861 YP_001514386.1 VanW family protein AE016830.1.gene2252. Protein 2e-62 45