Gene Information

Name : Clos_2810 (Clos_2810)
Accession : YP_001514337.1
Strain : Alkaliphilus oremlandii OhILAs
Genome accession: NC_009922
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3058267 - 3059052 bp
Length : 786 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bca:BCE_3768 iron compound ABC transporter, ATP-binding protein

DNA sequence : 
ATGACGATATTAAAAACAGAGAATTTAGAAACCTGCTATGAGAAATCAACCGTATTTAAGGATATCAATTTCTCCGTTGA
AGAAGGGGAAATAACAACAATTATAGGGCCCAACGGCTGTGGAAAATCCACCCTGCTAAAAACCATCGGCAGGATTATCA
AACAAAAAAACGGTGATGTTTTATTGAAAGGTACCAATATCAATCAATTGAATACGAAAAAAATTGCACAGGATTTAGCA
CTACTCCCTCAAAACCCCACAGCACCCCAGGAAATAAAAGTTGAAGAACTGATATCCTATGGGAGGTTTCCTCACTGTAA
AAAAATCAGTAAGCTAACTGCAAAGGATAGGGAAATCATTGAGTGGGCTATGGAGATTACCAAGGTGATGGATTATAGGG
ATCGGGAGATCGGCAGTCTTTCTGGAGGGCAAAGGCAAAAGGTGTGGCTGGCAATGGCCTTGGCACAGGAAACGGATGTA
CTGCTTTTAGATGAGCCCACAACATATTTAGATATGTCCCATCAATTAGAGGTATTAAAAATTGTAGATCAGCTGAATCG
GGAAAAAAGATGTACCATCGTTATGGTTTTGCATGATATTAATCATGCTGCTCGGTTTTCTCATAAAATTGTTGCCATGA
AGGCGGGCAAGATAATTGCAGAAGGAAAGCCTACGGAGGTTATCACAAAGGATGTACTAAAGAAAGTGTTTAATATAGAT
GCTAGAATCATGATGGACACAGAAAATAAGGCACCGGTATGCTTTGGATATGATAGTGCCCTATAA

Protein sequence : 
MTILKTENLETCYEKSTVFKDINFSVEEGEITTIIGPNGCGKSTLLKTIGRIIKQKNGDVLLKGTNINQLNTKKIAQDLA
LLPQNPTAPQEIKVEELISYGRFPHCKKISKLTAKDREIIEWAMEITKVMDYRDREIGSLSGGQRQKVWLAMALAQETDV
LLLDEPTTYLDMSHQLEVLKIVDQLNREKRCTIVMVLHDINHAARFSHKIVAMKAGKIIAEGKPTEVITKDVLKKVFNID
ARIMMDTENKAPVCFGYDSAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 5e-53 46
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 5e-53 46
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-53 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-53 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-53 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-53 45
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-51 43
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-55 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-53 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clos_2810 YP_001514337.1 ABC transporter BAC0164 Protein 9e-52 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clos_2810 YP_001514337.1 ABC transporter VFG1042 Protein 9e-52 43
Clos_2810 YP_001514337.1 ABC transporter VFG0925 Protein 7e-53 42