Gene Information

Name : Clos_2349 (Clos_2349)
Accession : YP_001513877.1
Strain : Alkaliphilus oremlandii OhILAs
Genome accession: NC_009922
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 2521525 - 2521761 bp
Length : 237 bp
Strand : -
Note : PFAM: helix-turn-helix domain protein; KEGG: cac:CAC2473 predicted transcriptional regulator

DNA sequence :
ATGAAGAATCGATTGAAAGCATTGAGAGAATCCTTCGAATTAACTCAAGAACAGCTAGGAGCATTGGTTGGCGTATCGAG
GCAGGCAATTAATTCTATTGAAACAGAGAAGTTTGAGCCCTCCATATGGCTGGCTTATGATATTTCAAAAGTATTTGAAT
GCTCTATTGAGGATATTTTTCTATTTGAGGAAAGTGAACGAAAATCAAGAGCTCAACAAAGTAGAGGTGTAGTTTAG

Protein sequence :
MKNRLKALRESFELTQEQLGALVGVSRQAINSIETEKFEPSIWLAYDISKVFECSIEDIFLFEESERKSRAQQSRGVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 4e-06 47
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 3e-06 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clos_2349 YP_001513877.1 XRE family transcriptional regulator VFG2175 Protein 1e-06 47
Clos_2349 YP_001513877.1 XRE family transcriptional regulator VFG2168 Protein 1e-06 47