Gene Information

Name : Clos_1881 (Clos_1881)
Accession : YP_001513417.1
Strain : Alkaliphilus oremlandii OhILAs
Genome accession: NC_009922
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1992744 - 1993100 bp
Length : 357 bp
Strand : -
Note : TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: csc:Csac_1336 single-strand binding protein

DNA sequence :
ATGAACAAAGTCATGTTATTAGGAAGGTTGGTTAAGGATGTAGAGTTAAGGTATTCGCAGGGTGAAAATCCTGTAGCAGT
AGGTAAGTATACCTTAGCTGTAAGTCGTCAATTTAGAAAGGAAGGTGAACCGGATGCAGATTTTATAAACATCATTGGTT
TTGGTAAAGCTGCAGAGTTTGCAGAGAAGTATTTTAAGAAAGGTCAGCAGATCGTTGTAGTAGGTAGATTGCAGGTTAGG
AATTATGAAAATGAAGAAGGTAGGAAAAATTTCTTTACTGAGGTTATCGTAGATGAACAATATTTCGCGGGAAATAAAAA
AGATAAATCTTCTGATGGTGGAAATGAGGTGAAATAG

Protein sequence :
MNKVMLLGRLVKDVELRYSQGENPVAVGKYTLAVSRQFRKEGEPDADFINIIGFGKAAEFAEKYFKKGQQIVVVGRLQVR
NYENEEGRKNFFTEVIVDEQYFAGNKKDKSSDGGNEVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 2e-12 50
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 4e-12 50
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 4e-12 50
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 1e-11 49
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 7e-12 49
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 5e-12 49
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 5e-12 49
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 1e-10 48
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 7e-12 48
EFAU085_00699 YP_008394223.1 single-strand binding protein Not tested Not named Protein 6e-17 47
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 1e-11 47
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 2e-13 46
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 3e-09 45