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Name : Clos_1638 (Clos_1638) Accession : YP_001513177.1 Strain : Alkaliphilus oremlandii OhILAs Genome accession: NC_009922 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1739024 - 1740706 bp Length : 1683 bp Strand : - Note : PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: tte:TTE1262 predicted ATPases involved in pili biogenesis, PilB homologs DNA sequence : ATGGCAGATAAGAAACTGAAATTGGGAGAGCTCTTACTATATGCAGGGAAGTTAACTCAAAGCCAACTGGATAATGCTCT GGATATCCAAAAGAAAACAGGTAAAAAATTAGGTGAGATTGTTGTATCTGAAAAATACACTACAGAAGACGATATTATTG AGGTCTTGGAATTTCAACTTGGAATACCTCATGTGGATTTAGACAAGTATGAAGTAAATCCCACTGTAGCAACACTGATA CCGGAAAACATCGTCCGAAGATATGAACTCATTGCGATAGACAAAAAAGATACAATATTAATCGTAGCAATGACGGACCC TTTGAATATTTTTGCTCTAGATGATGTCAAGCTCTTTGTTAAATCTGATATTCAGCCAGTCATCTCAACGAAAGAGAAAT TGATCAAGGCAATCGATAAATTTTATAGTAGCGAGACTACTAAAAAGGCTTTAGAAGAATTTGAAGAAAACTTTCTGCCC ATTAATACGGACGACATAGAAGAAAGTGAGTTGCTAGAAGTTACTACTGCACCCATCGTAAAACTTTTAAACTCTATTAT TGAGCAAGCCGTTAAGGAAAGGGCATCGGATATACATATAGAACCCTATGCTGAGGATATTCGAGTGCGGTTTCGTATTG ATGGAGATTTAAGAGAAATTATGACCTTGGCTAAAAATAGTATGTCGGGTATCGTTACGAGAATTAAAATCATAGGAAAA ATGAACATTGCAGAAAAACGAATTCCGCAGGATGGAAGAGTAGAGACTAAAATCAATGGAAGAGATATCGATATGAGAAT CTCTACCCTGCCCACAGTTTATGGAGAAAAAATTGTAATTAGGCTACTGGATAGATCCAACTTTAAATTCACAAAAGATG CTTTAGGTTTTAGTCAAAAGGACTTAAATCTATTCAATCAGATATTGGCCCAGCCATACGGTATGGTACTGGTTACAGGA CCAACTGGTAGTGGAAAAACTACCACTTTATATACGATACTTCAAGAACTAAATCAAATTGAAAAAAATGTGGTTACCAT AGAGGATCCAGTGGAATATAAATTGAAGGGCATTAATCAGATGCAGGTGAATATAAAGGCTGGATTAACATTTGCCTCAG GATTGAGATCTGTCCTCAGACAGGATCCAGACATCGTCATGGTTGGAGAAATAAGAGATAGTGAAACTGCTGAAATATCC ATCCGAGCAGCAATTACAGGGCATCTAGTTCTATCCACATTGCATACCAACGATAGCCCATCCACCGTATCTCGACTAAT TGATATGGGCATAAATTCTTATCTGGTATCATCAGCATTGATTGGTGTCATATCACAAAGGTTAGTCAAACTTCTCTGCC CCAAGTGCAAGCAAATATATGAAGGACAATCTTTGGAAAAGAAAATTTTAGGCGTACCAGAGCATGAAAAATTGCAATTA AGTAAAGCAGTTGGTTGTAATTTCTGTAATAATGGGTATAAAGGTAGAAAAGCAGTGCACGAAATAATGCCAATCAGCAA AAATATAAGACAATTAATAGATAGAAGAGCTAGTATAGATGAAATTAGGAAACAGGCTGTGACAGAAGGGATGCACTCCT TATTAGAATCAGCTTCGAGATTAGCCATCAATGGTGAAACTTCTTATGAAGAAGTCGTGAGAGTGGGATTCACATTAGAA TAG Protein sequence : MADKKLKLGELLLYAGKLTQSQLDNALDIQKKTGKKLGEIVVSEKYTTEDDIIEVLEFQLGIPHVDLDKYEVNPTVATLI PENIVRRYELIAIDKKDTILIVAMTDPLNIFALDDVKLFVKSDIQPVISTKEKLIKAIDKFYSSETTKKALEEFEENFLP INTDDIEESELLEVTTAPIVKLLNSIIEQAVKERASDIHIEPYAEDIRVRFRIDGDLREIMTLAKNSMSGIVTRIKIIGK MNIAEKRIPQDGRVETKINGRDIDMRISTLPTVYGEKIVIRLLDRSNFKFTKDALGFSQKDLNLFNQILAQPYGMVLVTG PTGSGKTTTLYTILQELNQIEKNVVTIEDPVEYKLKGINQMQVNIKAGLTFASGLRSVLRQDPDIVMVGEIRDSETAEIS IRAAITGHLVLSTLHTNDSPSTVSRLIDMGINSYLVSSALIGVISQRLVKLLCPKCKQIYEGQSLEKKILGVPEHEKLQL SKAVGCNFCNNGYKGRKAVHEIMPISKNIRQLIDRRASIDEIRKQAVTEGMHSLLESASRLAINGETSYEEVVRVGFTLE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-95 | 42 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-95 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Clos_1638 | YP_001513177.1 | type II secretion system protein E | VFG0182 | Protein | 2e-96 | 47 |
| Clos_1638 | YP_001513177.1 | type II secretion system protein E | VFG2048 | Protein | 2e-97 | 43 |
| Clos_1638 | YP_001513177.1 | type II secretion system protein E | VFG1876 | Protein | 3e-93 | 43 |
| Clos_1638 | YP_001513177.1 | type II secretion system protein E | VFG1880 | Protein | 6e-91 | 41 |
| Clos_1638 | YP_001513177.1 | type II secretion system protein E | VFG0112 | Protein | 2e-86 | 41 |
