Gene Information

Name : Clos_1593 (Clos_1593)
Accession : YP_001513132.1
Strain : Alkaliphilus oremlandii OhILAs
Genome accession: NC_009922
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1700019 - 1700903 bp
Length : 885 bp
Strand : -
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: cth:Cthe_0676 tyrosine recombinase XerD

DNA sequence :
ATGGAACAGCTAATTTCTAGTTTTACAGTTTATTTAGATCAAGAAAAAAAACTATCAAAGAATACTTTAGAATGCTATAA
GCGAGATATCGTGCAGTATTTAATATATATTGATCATGTTGTAAATCAGGATCTTTTTCTGACCAATAAAACTACTGTTA
TTACCTATTTATTGCATTTGCAGAAAAGTGGGAAATCTACTGCGACAATTTCGAGGAACTTGGCTTCCATTCGATGTTTT
TACAAGTTTCTATTGTTAAATAAGCGAATGGATTATGATCCAACGATTAATTTAGAAGCACCGAAGATTGAACGAAAAAC
ACCAATGACGTTGACTTTAGAAGAAGTGGACTTATTATTATCCCAGCCTCTAGAAATAACTGATAAAGGTGCTCGAGATA
AAGCAATGTTAGAACTTTTATATGCAACTGGAATCAGAGTGACAGAGTTGATTTCTTTAAATCTAGAAGACGTGAATCTA
AACTTAGGTTTTATTCGATGTCACAATGGTTCAAAAGAGCGATTTATTCCGACAGGGTCAATTGCATTGGAATCCCTGAC
AAAATACATAGAGAACCATAGAGCCAGTTTTTTAAAAGATCCTTCTGAAAGAAGTTTGTTTTTAAACTATTATGGCAAAC
CATTGAGCAGACAAGGATTTTGGAAAATTATAAAAGCTTATACGGAGCAATCGAATATTGAAAAAAGTATTACACCGAAC
ACCCTAAGGCATTCCTTTGCAACTCATTTAATCCAAAATGGAGCAGATTTAAAATCTGTTCAAGAGATGTTGGGTCATGC
TGATATTTCAACGACACAAATATATGCTTACGTTATGAAAAATAGAATAAAAGAGGTTTATAATAAAACTCATCCTAGGG
CCTGA

Protein sequence :
MEQLISSFTVYLDQEKKLSKNTLECYKRDIVQYLIYIDHVVNQDLFLTNKTTVITYLLHLQKSGKSTATISRNLASIRCF
YKFLLLNKRMDYDPTINLEAPKIERKTPMTLTLEEVDLLLSQPLEITDKGARDKAMLELLYATGIRVTELISLNLEDVNL
NLGFIRCHNGSKERFIPTGSIALESLTKYIENHRASFLKDPSERSLFLNYYGKPLSRQGFWKIIKAYTEQSNIEKSITPN
TLRHSFATHLIQNGADLKSVQEMLGHADISTTQIYAYVMKNRIKEVYNKTHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 8e-46 45
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 8e-46 45