Gene Information

Name : Clos_1497 (Clos_1497)
Accession : YP_001513036.1
Strain : Alkaliphilus oremlandii OhILAs
Genome accession: NC_009922
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : 3.1.1.3
Position : 1601296 - 1602105 bp
Length : 810 bp
Strand : +
Note : KEGG: amt:Amet_2707 flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein

DNA sequence : 
ATGAAGAATTCAAATGGAAAATTAATACAAATTTTACTTGATGGCAATAAATATATTCGTATGGCATGCTTCATCATTAT
TTGTTTTATCGTACTTGGGTCAAATCAAGCATTTGCACAGCCCAATATTACTGTGCCAAACTTACAACTGAGTATTGATG
GGGCTAGCAGCCCAGAGGAAACTGTGAATTCATTGCAGCTCTTGAGTCTATTGACCATATTATCATTAGCGCCGGCTATT
TTAATTATGGTCACAAGCTTTACTAGAATTATCATCGTATTATCTTTTCTGAGAAATGCACTTGCAACACAGCAAACACC
TCCAACCCAAGTACTGATAGGATTGGCTTTGTTTTTAACCTTTTTTATCATGGCACCTGTAGCTTCTGAAATAAATCAAA
ATGCGCTGCAACCTTTTTTAAACCAAGAAATTACTCAGCAGCAGGCAGTAGAAGAAGCGATGGACCCTTTAAGAGAGTTT
ATGTTTAGACAAACCAGAGAAAAGGATTTGGCTTTATTTATAGAAGCAAGTAACTCTGAAGTATCAGAGAATTTTCAAGT
GGAAGATATCAAAACGACTACTTTGATTCCTGCTTTTATAATCAGTGAGTTAAAGACAGCGTTTCAAATGGGATTCGTTT
TATTTATACCGTTCATAGTATTGGATATGGTAGTTGCTAGCGTTCTAATGTCTATGGGTATGATGATGTTACCCCCTGCA
ATGATTTCACTGCCATTTAAGCTCATGCTATTTGTAATGGTAGATGGATGGAACGTTTTAATTAAATCGTTATTATTAAG
CTTTAAATAG

Protein sequence : 
MKNSNGKLIQILLDGNKYIRMACFIIICFIVLGSNQAFAQPNITVPNLQLSIDGASSPEETVNSLQLLSLLTILSLAPAI
LIMVTSFTRIIIVLSFLRNALATQQTPPTQVLIGLALFLTFFIMAPVASEINQNALQPFLNQEITQQQAVEEAMDPLREF
MFRQTREKDLALFIEASNSEVSENFQVEDIKTTTLIPAFIISELKTAFQMGFVLFIPFIVLDMVVASVLMSMGMMMLPPA
MISLPFKLMLFVMVDGWNVLIKSLLLSFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 2e-28 41
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 1e-28 41
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 1e-28 41
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 2e-28 41
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 3e-28 41
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 3e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clos_1497 YP_001513036.1 flagellar biosynthetic protein FliP VFG0044 Protein 3e-27 41