Gene Information

Name : Clos_0137 (Clos_0137)
Accession : YP_001511700.1
Strain : Alkaliphilus oremlandii OhILAs
Genome accession: NC_009922
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 160405 - 162681 bp
Length : 2277 bp
Strand : +
Note : PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: amt:Amet_2822 ATPase AAA-2 domain protein

DNA sequence :
ATGAAGAAATGTTCGATATGTAATAAAAATATAGCAGTTGTTTTTGCAACGAAAATGGAAGATGGCAAGTCTGAAATGAA
GGGAATCTGTATGGAATGTGCAAAGAAGATGGGTCTTCCTATTATGAATCAAATCATGGAGCAAACGGGGATGACGGAAG
AAGAAATAGAAGGTTTATCCCAGCAGATGAATGACGTATTTGAAGAGATGGATTTAGAGGAAATGGAAGACGATAATTTT
CTAGGGAAACTATTTAAGGGTTCCTTGGGTTCTTTTAAAATGAAAGAGGATGAAGATATAGAAGTAGAAGAAACCGCAGA
GGATAAGGAAGAAATATTTGAAGAAAAGGCGAAGAAAAAGAAAAAAGGTAAGAAAAGAAAAAACTTAGATACTTACGGTA
CAAATTTGACAGATAGAGCAAGAAATAAAGAAATTGATAGAGTCATTGGTAGAAATAAGGAAATAGATAGGGTAGTACAG
ATTCTAAATAGAAGATCTAAAAATAATCCGATCCTAATCGGAGAGCCAGGTGTAGGTAAAACAGCCATTGCAGAAGGGTT
AGCTGGTCGTATTGTAGAGAAGCAGGTGCCAGCAAAGCTATTTAACGCAGAGGTCTACTTGCTAGATCTAACGGCCATTG
TAGCAGGAACCCAATTTAGAGGACAGTTTGAAGGTCGAATGAAGGCGATTATAGAAGAAGCACAGGAGTGTGGCAATATT
ATTTTAGTCATCGATGAGGTTCATAATATTATGGGTGCTGGGGAGGTTCATGGTGGTGTTATGAATGCTGCCAATATTTT
AAAGCCGGCGCTGGCTCGTGGGGAGATCCAAGTGATAGGTGCCACTACTCTAGATGAATACAGAAAGCATATTGAAAAGG
ATTCTGCTCTAGAGAGAAGGTTTCAACCAGTATTGGTTGAGGAACCTAGTGTAGAGGATACTATAGAAATATTAAAAGGA
ATCAAGGGCTATTATGAGGATTACCATAAAGTGAAAATATCCGATGAAGTGATCGAAGCTGCTGCAAAGATGTCTGAAAG
ATACATTACAGATCGATATTTACCAGATAAGGCCATCGATATTATTGATGAAGCAGGATCTAGAGTAAACCTAAGAAATG
AGGGCTTAGTAGAGATTGAAGGCTTAAAGGTGGAATTAAAGGCTATAGAGGAAAAGAAAGCAGAGGCAGCGAAGAAAAAC
GATTATGAAAAGGCAGCACAGTACAAAGTAGATGAATGTAGGATTTTAGATCGAATAGAAGAGCTGGAAGCAGAAGTGAA
TAAAAGTGCTTTAACAGTGGAGGATGTAGCTTTCGTAATTGAATCCTGGACGAATATTCCCGTGGGTAAAATTACAGAGG
AGGAAGCCAGCCGGTTGCTAAGCCTTGAAGAACAGCTCCACAGGAGGGTGGTTGGACAGAAGGATGCAGTGCGAAGCCTT
TCTAGAACCATCAGACGGAACCGCTCTGGATTTAGAAAGAAGAGAAAGCCAGCTTCCTTTATATTCGTTGGACCTACGGG
TGTAGGAAAGACAGAGCTAGTGAGGGCTTTAGCAGAAGAACTATTTGGCAGCGAAGAAGCGATGATTCGTGTGGATATGT
CAGAATATATGGAAAAACACACGGTTTCTAAATTAATTGGAGCGCCTCCAGGATACGTAGGGTATGATCAAGGTGGTCAG
CTAACAGATAAGGTTCGAAGAAAGCCATACTCCGTAATTTTATTAGATGAAATAGAAAAGGCCCATCCAGATGTATTCAA
TATGCTGCTTCAAATACTGGAAGACGGCAGATTAACCGATAGTCAAGGAAGAACCGTACACTTTGAAAACACCGTAGTCA
TTATGACTTCCAATGCAGGGACTCAAATAAAATCGGGTAGTATGGGCTTTGGCAATAGAGGATATGAAGCCTTAGAAAAT
CGTGCGAAGGATGCTTTAAAAGAGACCTTTAGACCGGAGTTTTTAAACAGAGTAGATGAAACCATTGTATTTACACAGCT
ATCTAAGGAAGAATTGAGAGAGATTATAGAGCTGATGTTAAAAGATGTCATTGAAGATGTGAAGGAAAAAGGGATGACCA
TCACCATTTCAGATGCGGTGAAAGATTTTATATTAGAAAAGGGCTACGATGAAAAATATGGTGCCAGACCTTTAAGAAGG
GTGATCCAAAGATCCATTGAAGATGAAATTGCAGAGGAATATATTAAGAATACCTTTGTTCCAGGAGATCATATTCAGGT
AGATCTAAAGGAAGACAGAGTTGTACTTAGCAAATAG

Protein sequence :
MKKCSICNKNIAVVFATKMEDGKSEMKGICMECAKKMGLPIMNQIMEQTGMTEEEIEGLSQQMNDVFEEMDLEEMEDDNF
LGKLFKGSLGSFKMKEDEDIEVEETAEDKEEIFEEKAKKKKKGKKRKNLDTYGTNLTDRARNKEIDRVIGRNKEIDRVVQ
ILNRRSKNNPILIGEPGVGKTAIAEGLAGRIVEKQVPAKLFNAEVYLLDLTAIVAGTQFRGQFEGRMKAIIEEAQECGNI
ILVIDEVHNIMGAGEVHGGVMNAANILKPALARGEIQVIGATTLDEYRKHIEKDSALERRFQPVLVEEPSVEDTIEILKG
IKGYYEDYHKVKISDEVIEAAAKMSERYITDRYLPDKAIDIIDEAGSRVNLRNEGLVEIEGLKVELKAIEEKKAEAAKKN
DYEKAAQYKVDECRILDRIEELEAEVNKSALTVEDVAFVIESWTNIPVGKITEEEASRLLSLEEQLHRRVVGQKDAVRSL
SRTIRRNRSGFRKKRKPASFIFVGPTGVGKTELVRALAEELFGSEEAMIRVDMSEYMEKHTVSKLIGAPPGYVGYDQGGQ
LTDKVRRKPYSVILLDEIEKAHPDVFNMLLQILEDGRLTDSQGRTVHFENTVVIMTSNAGTQIKSGSMGFGNRGYEALEN
RAKDALKETFRPEFLNRVDETIVFTQLSKEELREIIELMLKDVIEDVKEKGMTITISDAVKDFILEKGYDEKYGARPLRR
VIQRSIEDEIAEEYIKNTFVPGDHIQVDLKEDRVVLSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 6e-149 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clos_0137 YP_001511700.1 ATPase VFG0080 Protein 6e-151 54
Clos_0137 YP_001511700.1 ATPase VFG0079 Protein 2e-159 52