Gene Information

Name : Clos_1200 (Clos_1200)
Accession : YP_001512742.1
Strain : Alkaliphilus oremlandii OhILAs
Genome accession: NC_009922
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1299566 - 1300261 bp
Length : 696 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: spa:M6_Spy0664 ABC transporter ATP-binding protein

DNA sequence : 
ATGATGCGTAAAGAAATTCTTTCTATGGAGAATATCGTAAAATCGTACCAAATGGGAGATGAAGAGCAAATCGTATTGAA
AGGGATCAATTTAAATGTACATGCTGGAGAGTTCCTCTCTATCTTAGGTCCATCTGGCTCTGGTAAGTCCACGATGATGA
ATATTCTTGGATGCTTGGATACTCCTACAGAAGGAGAATACACCCTAGGAGGGCGTAAAATTTCAGATTTAGACGAGATT
GAATTGGCACATATTCGTAGCAAAGAGATCGGATTCATATTTCAGTCATTTCATTTGCTACCCAGACTTTCTGCAGTGGA
AAATGTAGAATTGCCCATGATTTATGCAGGTGTCTCACCTTCTGAGCGTAAACAGAGAGCGAAAGAAATGCTGGAGCGTG
TAGGTCTGGCAGAAAAGATTAACCATTATCCAAAGCAGCTATCCGGTGGACAGCAACAGCGTGTTGCAATTGCAAGGGCA
TTATCGACGAATCCAACCATTCTTCTTGCGGACGAACCAACGGGTGCTCTCGATCAAAATACAGGTCGTCAAATCATGGA
GTTGTTTCGAGAATTGCACGAAGAGGGACGAACCATTATTATGATTACCCATGACGTCGATATTGCTAAGAATGCAAGTC
GAACCGTAAGAATATTGGATGGCAACTTGTACGAGGAGGGAGAAAAGAATGATTAG

Protein sequence : 
MMRKEILSMENIVKSYQMGDEEQIVLKGINLNVHAGEFLSILGPSGSGKSTMMNILGCLDTPTEGEYTLGGRKISDLDEI
ELAHIRSKEIGFIFQSFHLLPRLSAVENVELPMIYAGVSPSERKQRAKEMLERVGLAEKINHYPKQLSGGQQQRVAIARA
LSTNPTILLADEPTGALDQNTGRQIMELFRELHEEGRTIIMITHDVDIAKNASRTVRILDGNLYEEGEKND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-37 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-38 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-38 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-38 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clos_1200 YP_001512742.1 ABC transporter NC_012469.1.7686878. Protein 7e-61 59
Clos_1200 YP_001512742.1 ABC transporter NC_008702.1.4606598. Protein 9e-47 46
Clos_1200 YP_001512742.1 ABC transporter CP001581.1.gene598.p Protein 2e-36 43
Clos_1200 YP_001512742.1 ABC transporter CP001581.1.gene798.p Protein 6e-38 43
Clos_1200 YP_001512742.1 ABC transporter NC_012469.1.7685735. Protein 5e-38 41