Gene Information

Name : Clos_1090 (Clos_1090)
Accession : YP_001512632.1
Strain : Alkaliphilus oremlandii OhILAs
Genome accession: NC_009922
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 1186243 - 1186674 bp
Length : 432 bp
Strand : -
Note : PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: sep:SE0081 hypothetical protein

DNA sequence : 
ATGAATGGTTTATCAATAGGTGAAGTTGCAAAAAAATCTAATGTGAATATTGAAACCATCAGGTATTATGAAAGACGTGG
CTTAATTTCAGAACCACCTAGAACTGAATCAGGTTATCGAATATTTCCTTTAGAAACTGTCGAGAGGATTAAATTTATTA
AGCGTTCTCAAGAATTAGGCTTTTCTCTCGATGAAATTGAAAAACTTCTAGCAATTACAGAAGATGAAGAACACTTTGAT
TCTAAAGAAATTCTTGATTTTGCTACTCAAAAAATTAGGGAGATTGAATTAAAAATTCATGATCTCCAAAAAATCAAAAC
TACTTTAGAAGATCTATCTGCTCAATGTCCTGGATCAGGCAATCCTATTTGTAAATGTCCAATTGTTGAAACTTTATCGA
AGGGAGGTGGAAAAGAATGGCTAAAAGATTAA

Protein sequence : 
MNGLSIGEVAKKSNVNIETIRYYERRGLISEPPRTESGYRIFPLETVERIKFIKRSQELGFSLDEIEKLLAITEDEEHFD
SKEILDFATQKIREIELKIHDLQKIKTTLEDLSAQCPGSGNPICKCPIVETLSKGGGKEWLKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0081 NP_763636.1 hypothetical protein Not tested SCCpbp4 Protein 7e-30 48
unnamed BAB47646.1 orf2 Not tested Type-III SCCmec Protein 5e-30 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clos_1090 YP_001512632.1 MerR family transcriptional regulator BAC0682 Protein 7e-30 52
Clos_1090 YP_001512632.1 MerR family transcriptional regulator BAC0680 Protein 3e-30 48
Clos_1090 YP_001512632.1 MerR family transcriptional regulator BAC0569 Protein 2e-21 42
Clos_1090 YP_001512632.1 MerR family transcriptional regulator BAC0190 Protein 1e-23 42