|
Name : Franean1_7308 (Franean1_7308) Accession : YP_001511533.1 Strain : Frankia sp. EAN1.pec Genome accession: NC_009921 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 8932112 - 8933470 bp Length : 1359 bp Strand : - Note : TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: tfu:Tfu_0019 DnaB helicase DNA sequence : TTGAGCGTCGCCGACATCGCGCGCGGGCCTGGATCCGCGGTCGAGTTCGATCGCACCCCGCCCCACGATCTTCCTGCGGA GCAGAGCGTGCTGGGGGGCATGCTGCTCTCGAAAGACGCGATCGCGGACGTCGTCGAGGTCCTCCGGGCGAGCGACTTCT ACCGGCCGGCGCACGCCACCGTCTACACCACGATCGGCGACCTCTACGGCCGTGGGGAGCCGGCCGACGTCATCAGCGTC GCGGCCGAGCTGGGCCGGCAGAACCTGCTGGAGCGGGTCGGCGGGCCGGCCTACATGCACACGCTGATCTCCAGCGTCCC GACCGCGGCGAACGCCGGCTACTACGCGCGCATCGTCGCGGAGAAGGCCGTGCTGCGCCGGCTGGCCGAGGCCGGCACGC GCATCGTGCAGCTCGCCTACGGCCCGGCGCCCGACGTCACCGACGTCGTCGACCGGGCCCAGGCGGCCGTCTACGAGGTG ACCGAGCGGCGCACGAACGATGACTACACCCCGCTCGGCGAGTTGCTGAACCCGGCGCTGGAGGAGATCGAGGCGATCCA GGCCCACGACGGCGCCCTGACCGGGGTGCCGACGGGGTTCACCGACCTCGACGAGCTCACCAACGGCCTGCACGGCGGCC AGCTGTGGATCGTCGCGGCCCGGCCCGCGGTCGGCAAGTCGACCCTGGGCCTGGATTTCGCCCGCGCCGCGTCGATCAAG AACGGGATGACCTCGGTCGTCTTCTCGCTGGAGATGAGCCGCATGGAGATCACCATGCGGCTGCTCTCCGCCGAGGCCCG GGTGTCGCTGCAGAACATCCGCACCGGTCGGCTGACCGACGACGACTGGGGTCGGCTGGCCCGGCGGATGGGGGAGGTCG CCGAGGCACCGCTGTACATCGACGACAGCCCGCACCTGACGATGATGGAGATCCGGGCGAAGGCGCGGCGGCTCAAGCAG CGCAACGACCTGCGGCTGGTCATCCTCGACTACCTGCAGCTGATGTCCTCGCCGAAGAAGGTCGAGAGCCGCCAGCAGGA GGTCAGCGAGATCTCCCGGTCGCTGAAGCTGCTCGCGAAGGAGCTGGAGGTCCCCGTCGTGGCCATCTCGCAGCTCAACC GGGCCTCCGAACAACGGGCCGACAAACGGCCCCAGGTCTCCGACCTGCGCGAGTCCGGCAGCCTCGAGCAGGACGCCGAC GCGGTCATCCTGCTCTACCGGGAGGACACGGTGGAGAAGGAGTCCGCGCGGGCCGGCGAGGCCGATCTGATCATCGCCAA GCACCGTAACGGCCCCACAGGCACCGTCACGGTCGCCTTCCAGGGCCACTACTCCCGGTTCGTCGACATGGCCAACTGA Protein sequence : MSVADIARGPGSAVEFDRTPPHDLPAEQSVLGGMLLSKDAIADVVEVLRASDFYRPAHATVYTTIGDLYGRGEPADVISV AAELGRQNLLERVGGPAYMHTLISSVPTAANAGYYARIVAEKAVLRRLAEAGTRIVQLAYGPAPDVTDVVDRAQAAVYEV TERRTNDDYTPLGELLNPALEEIEAIQAHDGALTGVPTGFTDLDELTNGLHGGQLWIVAARPAVGKSTLGLDFARAASIK NGMTSVVFSLEMSRMEITMRLLSAEARVSLQNIRTGRLTDDDWGRLARRMGEVAEAPLYIDDSPHLTMMEIRAKARRLKQ RNDLRLVILDYLQLMSSPKKVESRQQEVSEISRSLKLLAKELEVPVVAISQLNRASEQRADKRPQVSDLRESGSLEQDAD AVILLYREDTVEKESARAGEADLIIAKHRNGPTGTVTVAFQGHYSRFVDMAN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 1e-72 | 43 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 9e-71 | 41 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 9e-71 | 41 |
