Gene Information

Name : Franean1_7136 (Franean1_7136)
Accession : YP_001511363.1
Strain : Frankia sp. EAN1.pec
Genome accession: NC_009921
Putative virulence/resistance : Resistance
Product : peptidase M15D vanX D-ala-D-ala dipeptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2173
EC number : -
Position : 8717019 - 8717669 bp
Length : 651 bp
Strand : -
Note : PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; KEGG: sco:SCO3596 putative D-alanine:D-alanine dipeptidase

DNA sequence :
ATGAAGGATGACTTCGTCTTTGTGGACGAGTTTGTACCCGGAATACGCTGGGATGCCAAGTACGCCACCTGGGACAACTT
CACCGGCAGACCGGTGAACGGATACCTGGCAAATCGAATCGTCGGTACGAGGGCTCTGTGCGCCGCCCTGGAAGGTGCGC
GAGAAGAAGCCAGATCCCTTGGCCTGGGCCTGCTTCTCTGGGATGGTTATCGCCCGCAACGCGCCGTAGACTGCTTTCTG
CGCTGGTCAACACAGCCGGAGGACGGCCAGACGAAGCCACGGCACTATCCGAACCTTGACAGAGCCGAGCTGTTCGAGAA
GGGATACGTGGCCGCCAGGTCGGGCCACAGCCGGGGAAGCACCATTGACCTGACGCTCTTTCACCTGGCCACCGGTGACC
TTGCTCCCATGGGCGGTGACCATGATCTGATGGACTCAGTCTCACATCATGGAGCAAAGGGAATCACGCAGATCGAAGCG
AGAAACCGTCAACATCTTCGTTCCGTCATGGAGGCCTGTGGTTTCAGCTCCTACGAATGCGAGTGGTGGCACTACACACT
GAAGGACGAACCCCATCCAGACACCTATTTCGATTTTCCCATCACACCGCTGGGCCGGGCCAGGAAAATTGGTGAAACTT
CGAAGCGCTGA

Protein sequence :
MKDDFVFVDEFVPGIRWDAKYATWDNFTGRPVNGYLANRIVGTRALCAALEGAREEARSLGLGLLLWDGYRPQRAVDCFL
RWSTQPEDGQTKPRHYPNLDRAELFEKGYVAARSGHSRGSTIDLTLFHLATGDLAPMGGDHDLMDSVSHHGAKGITQIEA
RNRQHLRSVMEACGFSSYECEWWHYTLKDEPHPDTYFDFPITPLGRARKIGETSKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanX NP_815950.1 D-alanyl-D-alanine dipeptidase Not tested Not named Protein 5e-64 64
vanXB YP_008394260.1 D-alanyl-D-alanine dipeptidase Not tested Not named Protein 2e-63 63

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Franean1_7136 YP_001511363.1 peptidase M15D vanX D-ala-D-ala dipeptidase U82965.2.orf32.gene. Protein 1e-81 82
Franean1_7136 YP_001511363.1 peptidase M15D vanX D-ala-D-ala dipeptidase AF155139.2.orf6.gene Protein 1e-64 65
Franean1_7136 YP_001511363.1 peptidase M15D vanX D-ala-D-ala dipeptidase U35369.1.gene7.p01 Protein 3e-64 64
Franean1_7136 YP_001511363.1 peptidase M15D vanX D-ala-D-ala dipeptidase AE016830.1.gene2249. Protein 2e-64 64
Franean1_7136 YP_001511363.1 peptidase M15D vanX D-ala-D-ala dipeptidase AF130997.1.orf5.gene Protein 3e-64 64
Franean1_7136 YP_001511363.1 peptidase M15D vanX D-ala-D-ala dipeptidase AF310956.2.orf6.gene Protein 7e-64 63
Franean1_7136 YP_001511363.1 peptidase M15D vanX D-ala-D-ala dipeptidase NC_005054.2598281.p0 Protein 3e-62 61
Franean1_7136 YP_001511363.1 peptidase M15D vanX D-ala-D-ala dipeptidase M97297.gene.p01 Protein 3e-62 61
Franean1_7136 YP_001511363.1 peptidase M15D vanX D-ala-D-ala dipeptidase NC_014475.1.orf4.gen Protein 3e-62 61
Franean1_7136 YP_001511363.1 peptidase M15D vanX D-ala-D-ala dipeptidase FJ349556.1.orf5.gene Protein 4e-60 60