Gene Information

Name : Franean1_6511 (Franean1_6511)
Accession : YP_001510754.1
Strain : Frankia sp. EAN1.pec
Genome accession: NC_009921
Putative virulence/resistance : Unknown
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 7920138 - 7920785 bp
Length : 648 bp
Strand : +
Note : PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: fal:FRAAL0665 putative two-component system response regulator

DNA sequence :
GTGATCCGGGTCGTGGTCGCCGACGATCAGCCTCTCGTCCGTCTCGGGCTGAAGGTCCTGATCGAGACCGAGGACGACCT
CGAGCTCACCGGCGAGGCCGAGGACGGCCAGGCCGCGCTGGCCCTGGTCCGCCGCACCCGCCCGGACGTCGTCCTCCTCG
ACATCAGGATGCCCGTCCTGGACGGCCTCGCCGCCCTGCGCGCGATCACCGCCGACCCCGCGCTGACCGACACCCGCGTC
GTCATGGTCACCACGTTCGAGTTGGACGAGTACGTCTTCGAGGCTCTGCGCAACGGCGCGTCCGGGTTCGTCCTGAAGGA
CACCGAGCCCGCGGACCTGCTCCGCGCGATCCGGGTCGTCGCCGCCGGCGAGTCGCTGCTCTCCCCCACGATCACCCGCC
GCGTGATCGAGACGTTCGCCCGGCGCCCGGCGGCGCCCGCCGCCGTGGACCTGACCAGTCTCACCGTCCGGGAACGCGAG
GTGATGGGCCTGGTGGGGCTGGGCCTGTCCAACGACGAGATCGCCGCCCGGCTCGTCATCAGCCCGGCGACGGCACGAAC
CCATGTGAGCCGGGTGATGGTCAAGCTCTCCGCCCGGGACCGCGCCCAGCTCGCCGTCCTCGCCAACCAGGCAGGTCTGG
CCGGCTGA

Protein sequence :
MIRVVVADDQPLVRLGLKVLIETEDDLELTGEAEDGQAALALVRRTRPDVVLLDIRMPVLDGLAALRAITADPALTDTRV
VMVTTFELDEYVFEALRNGASGFVLKDTEPADLLRAIRVVAAGESLLSPTITRRVIETFARRPAAPAAVDLTSLTVRERE
VMGLVGLGLSNDEIAARLVISPATARTHVSRVMVKLSARDRAQLAVLANQAGLAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
regB YP_001220830.1 putative two-component system response regulator Not tested chp/tomA region Protein 4e-37 45