Gene Information

Name : Franean1_6443 (Franean1_6443)
Accession : YP_001510686.1
Strain : Frankia sp. EAN1.pec
Genome accession: NC_009921
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 7834192 - 7834953 bp
Length : 762 bp
Strand : +
Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: fal:FRAAL2642 3-oxoacyl-[acyl-carrier-protein] reductase

DNA sequence :
ATGTCGGTATTGGACAGATTCCGCCTCGACGGCAGGGTCGCCATCGTCACCGGGGCCTCGTCGGGGATCGGCGTCGGCTT
CGCCCGCGGGCTCGCCCAGGCCGGCGCGGACGTCACTCTCGGTGCCCGGCGCACCGACCGGCTCGCCGCGACCGCCGCGC
TGGTCGAGGCGGAAGGCCGCCGGGCCGCCGCCGTCGGCACCGACGTGGCCGACCCGGAGTCGTGCCGGAACCTCGTCACG
GCCGCCATGGACACCTTCGGGCGGGTCGACATCCTGGTCAACAACGCCGGGGTCGGTTCGGCCCACCCGGCGCTGCGGGA
GACCCCGGAGCAGTTCCGCTCGGTCATCGACGTCAACCTCAACGGCTGCTACTGGATGGCCCAGGCCGCCGCGGCCGTCA
TGCAGCCGGGCAGCAGCATCATCAACATCTCCAGCGTGCTCGGCCTGACGACGGCCGGCCTCCCGCAGGCCGCCTATTCG
GCCAGTAAGGCGGCCCTGCTCGGGCTGACCCGCGACCTCGCCCAGCAGTGGACGGGCCGGCGCGGGATCCGCGTGAACGC
CCTGGCCCCCGGGTTCTTCGAGTCCGAGATGACCGACCAGTACCTGCCCGGGTACCTGGAGAGCCAGTCGGCACGGATCC
TCGCCGGCCGCTTCGGCGACCTTGAGGAGCTGACCGCCGCGCTGGTCTTCCTCGCCTCCGACGCCGGCGGCTACGTCACC
GGACAGACCCTCGTCGTCGACGGCGGTGTCTCCATCACCTGA

Protein sequence :
MSVLDRFRLDGRVAIVTGASSGIGVGFARGLAQAGADVTLGARRTDRLAATAALVEAEGRRAAAVGTDVADPESCRNLVT
AAMDTFGRVDILVNNAGVGSAHPALRETPEQFRSVIDVNLNGCYWMAQAAAAVMQPGSSIINISSVLGLTTAGLPQAAYS
ASKAALLGLTRDLAQQWTGRRGIRVNALAPGFFESEMTDQYLPGYLESQSARILAGRFGDLEELTAALVFLASDAGGYVT
GQTLVVDGGVSIT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01499.1 2-deoxy-D-gluconate 3-dehydrogenase Not tested PAGI-1 Protein 1e-22 43