Gene Information

Name : Franean1_0601 (Franean1_0601)
Accession : YP_001504966.1
Strain : Frankia sp. EAN1.pec
Genome accession: NC_009921
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 697782 - 700046 bp
Length : 2265 bp
Strand : +
Note : One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions

DNA sequence :
ATGAGTACCACCACCATCGCCGCGCACCAGGACGGCGCCAGCGCCGCCGGCCGGCGGGAAACGCAGCCGGCCCGACCGCG
GCGGGTCGGGGGCGGTCTGCTCGACCCGAAGCAGCTTTGGACGTCCCTGCCCAGCGCGGTGCGCAAGCTCGACCCGCGGA
CCCTGTGGCACAACCCGGTCATGCTGATCGTCGAGGTCGGCGCCGCGTACACCACCGTTCTCGCGATCATCGACCCGTCG
GCGTTCGGCTGGATGATCACGGTCTGGCTGTGGCTCACCGTGATCTTCGCCAACCTCGCCGAGGCCGTCGCGGAGGGGCG
CGGCAAGGCGCAGGCCGCCGCCCTGCGCCGGGCCAGGACCGAGACCGTCGCCCGCCGGCTCGTCGGCTGGCGCGCGGGCC
AGCCCGTCGAGAGCGCCGCGGTCGAGAGCGTGCCGGCGCCGCGGCTCGCCCAGCACGACCTGGTCGTGGTCGAGGCGGGG
GAGCTCATCCCCGGGGACGGTGACATCGTCGAGGGCATCGCCAGCGTGGATGAGTCGGCGATCACGGGCGAGTCGGCGCC
GGTGATCCGGGAGTCCGGTGGTGACCGGTCCTCGGTCACCGGCGGGACGAGGGTGCTCTCCGACCGGATCGTCGTCCGGA
TCACCCAGAAGCCCGGGGAGAGCTTCATCGATCGGATGATCGCCCTGGTCGAGGGCGCGAACCGGCGTAAGACGCCGAAC
GAGATCGCGCTCAACATCCTGCTGGCCGCGTTGACCGTCATCTTCCTGCTGGCCGTCGCCACGCTGCAGCCGCTGGCGAT
CTACTCGAAGGCCCAGCAGCCGGCGCTGCCGGACAGCTCCACCCTGACCGGTGACGGGATCACCGGGATCGTGCTCGCGT
CCCTGCTGGTCTGCCTGATCCCGACCACGATCGGAGCGCTGCTTTCCGCGATCGGCATCGCCGGGATGGACCGGCTCGTC
CAGCGCAACGTGCTCGCGATGAGCGGCCGGGCGGTGGAGGCCGCCGGCGACGTCAACACGCTCCTGCTCGACAAGACCGG
CACCATAACCCTGGGGAACCGGCAGGCCAGCGCGTTCCTCGCCGTCGGCGGCGTGAGCGAGGCGGAGCTGGCGGACGCCG
CCCAGCTCTCCTCGCTCGCCGACGAGACCCCCGAGGGCCGCTCGGTCGTCGTGTTCGCCAAGGAGCACCACGGCCTGCGC
GAACGCACCCCGGGCGAGCTGGCGCACGCGACGTTCGTGCACTTCACCGCCCAGACCAGGATGTCCGGCGTCGACCTGGC
GCCCGAGCCCACCGGCCCGGGCGCGCCCGGCGCCCCCGGGACGTCCAGCGCCGTCGGCGCCCGGCGGGTTCGCAAGGGGG
CGGCAAGCGCGGTCACCCGGTGGGTGCGGGAGAACGGGGGGCAGGTACCCGCCCAGGTCGGGGAGATCGTGGACGGTATC
TCCGCCTCGGGCGGTACCCCGCTGGTCGTAGGCGAGGTCATCGACGGCCCGTCCGGCCCGTCCGGCCCGTCCGGCCCGGC
CGCGCGGGTGCTCGGCGTCATCCAGCTCAAGGACGTCGTGAAATCCGGCATGCGGGAGCGCTTCGACGCCATGCGCCGGA
TGGGTATCCGCACCGTGATGATCACCGGGGACAACCCGCTCACCGCGAAGGCGATCGCCGACGAGGCGGGTGTCGACGAC
TTCCTCGCCGAGGCGACTCCGGAGGACAAGCTCGCGCTGATCCGCAGGGAGCAGGCGGGCGGCAAGCTCGTCGCGATGAC
CGGCGACGGCACCAACGACGCGCCCGCGCTCGCGCAGGCCGACGTCGGGGTGGCCATGAACACCGGCACGTCGGCCGCGA
AGGAGGCCGGCAACATGGTCGACCTCGACAGCAACCCGACGAAGCTCATCGAGATCGTCGAGATCGGCAAGCAGCTGCTC
ATCACCCGCGGGGCGCTGACGACCTTCTCCATCGCCAACGACGTCGCCAAGTACTTCGCGATCATCCCGGCGATGTTCGC
CGGCGTCTACACCGGCCTGGACAGGCTCAATGTCATGCGGCTGGCCAGCCCCGAGTCGGCGATCCTCTCCGCGGTCATCT
TCAACGCCCTCGTCATCGTCGCGCTGATCCCGCTCGCGCTGCGCGGTGTGCGCTACACCCCCGCCAGCGCGTCGAAGCTG
CTCAGCCGCAACCTCTACGTCTACGGCCTCGGTGGGATCGTCGTCCCGTTCGCCGGCATCAAGGTCATCGATCTTCTCGT
CCAGTTCATCCCGGGAGTGGGCTGA

Protein sequence :
MSTTTIAAHQDGASAAGRRETQPARPRRVGGGLLDPKQLWTSLPSAVRKLDPRTLWHNPVMLIVEVGAAYTTVLAIIDPS
AFGWMITVWLWLTVIFANLAEAVAEGRGKAQAAALRRARTETVARRLVGWRAGQPVESAAVESVPAPRLAQHDLVVVEAG
ELIPGDGDIVEGIASVDESAITGESAPVIRESGGDRSSVTGGTRVLSDRIVVRITQKPGESFIDRMIALVEGANRRKTPN
EIALNILLAALTVIFLLAVATLQPLAIYSKAQQPALPDSSTLTGDGITGIVLASLLVCLIPTTIGALLSAIGIAGMDRLV
QRNVLAMSGRAVEAAGDVNTLLLDKTGTITLGNRQASAFLAVGGVSEAELADAAQLSSLADETPEGRSVVVFAKEHHGLR
ERTPGELAHATFVHFTAQTRMSGVDLAPEPTGPGAPGAPGTSSAVGARRVRKGAASAVTRWVRENGGQVPAQVGEIVDGI
SASGGTPLVVGEVIDGPSGPSGPSGPAARVLGVIQLKDVVKSGMRERFDAMRRMGIRTVMITGDNPLTAKAIADEAGVDD
FLAEATPEDKLALIRREQAGGKLVAMTGDGTNDAPALAQADVGVAMNTGTSAAKEAGNMVDLDSNPTKLIEIVEIGKQLL
ITRGALTTFSIANDVAKYFAIIPAMFAGVYTGLDRLNVMRLASPESAILSAVIFNALVIVALIPLALRGVRYTPASASKL
LSRNLYVYGLGGIVVPFAGIKVIDLLVQFIPGVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 1e-156 58
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 8e-157 58
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 9e-134 52
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 9e-134 52
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 9e-134 52
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 6e-135 52
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 6e-134 52
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 9e-134 52