Gene Information

Name : rph (Franean1_5650)
Accession : YP_001509907.1
Strain : Frankia sp. EAN1.pec
Genome accession: NC_009921
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 6863336 - 6864118 bp
Length : 783 bp
Strand : +
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
GTGATCAGAGTCGATGGCAGAACCACGGACCAGCTCCGCGACGTGACGATCGAGCGGGGCTGGCAGGAGCACGCGGAGGG
GTCGGCGCTGATCTCCGCCGGCCGGACCAGGGTGCTGTGCGCGGCCTCCGTCACCGAGGGGGTGCCCCGGTGGCGCAAGG
GCAGCGGCCTGGGCTGGGTGACGGCCGAGTACTCGATGCTGCCGCGAGCCACGCACACCCGCAACGACCGGGAGTCCGTC
CGCGGGCGGATCGGCGGGCGGACCCACGAGATCTCCCGGCTGATCGGGCGCAGCCTGCGGGCCGCGATCGACCTGAAGGC
CCTCGGCGAGAACACCATCGCCATCGACTGTGACGTGCTGCTCGCCGACGGCGGCACCCGCACGGCCGCGATCACCGGCG
CCTATGTGGCGCTCGCCGACGCCTGCCGGTGGCTGGGACGTCCCGCGGCGATCGTCACCAGTGTCTGCGCGGTCAGCGTC
GGCGTGGTCGGCGGCGTGCCCATGCTCGACCTCGCCTACACCGAGGACTCGACCGCCGACACGGACATGAACGTCGTCCG
CACCGGCGCGGGTGGCTTCGTCGAGGTCCAGGGGACGGCCGAGGGCACCCCGTTCGAACGGTCGACGCTCGACGAGCTGC
TCGACCTCGCCGTGGCCGGCTGCACCCGCCTGACCGAGATCCAGAACGCCGCGCTGGCCGCCCCGCCGGCCGCCGGCCCG
CCCGCCCCGGAACGCGCCGGCGCCGGCAGTGGCAGTGGCGGGAAGGGCACGGGGTCACGGTGA

Protein sequence :
MIRVDGRTTDQLRDVTIERGWQEHAEGSALISAGRTRVLCAASVTEGVPRWRKGSGLGWVTAEYSMLPRATHTRNDRESV
RGRIGGRTHEISRLIGRSLRAAIDLKALGENTIAIDCDVLLADGGTRTAAITGAYVALADACRWLGRPAAIVTSVCAVSV
GVVGGVPMLDLAYTEDSTADTDMNVVRTGAGGFVEVQGTAEGTPFERSTLDELLDLAVAGCTRLTEIQNAALAAPPAAGP
PAPERAGAGSGSGGKGTGSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-55 58