Gene Information

Name : Franean1_0530 (Franean1_0530)
Accession : YP_001504896.1
Strain : Frankia sp. EAN1.pec
Genome accession: NC_009921
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 618121 - 618954 bp
Length : 834 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV3634 putative ABC-transporter ATP-binding protein

DNA sequence : 
ATGACGGCGGCGGTGGCGCTGCGCGGCGTCAGCAAGGTCTACGGCCGACGGACCGCCGCCGTGACGGCGCTCGACGACGT
CACGCTCGCCTTCGTCTGCGGCACCTTCACCGCGGTGATGGGTCCGTCGGGCTCGGGCAAGTCGACGCTGCTGCAGTGCG
CGGCGGGTCTGGACCGGCCGACGGCGGGCGAGGTCTTCCTCGACGGCGAGAACCTGGCCCGGCTGAGCGAGAACGCGCTG
ACCGTGCTGCGCCGGGACCGGGTCGGCTTCGTCTTCCAGGCCTTCAACCTGGTGCCGTCCCTGACCGCCGAGCTGAACGT
GGCCTTGCCACTGCGGCTGGCCGGACGGCGGCCGCGCCGGCGCGAGGTCCGGGAGGTGCTCGAGGCGGTGGGCCTGGCCG
ACCGGGGCCGGCGCCGGCCGGCGGAGCTGTCGGGCGGCCAGCAGCAGCGGGTGGCGATCGCGCGGGCGCTGGTGACCCGT
CCGTCGGTGCTGTTCGCCGACGAGCCCACCGGCGCGCTGGACTCGACGACCGGCCGCGAGGTGCTGACGTTGCTGCGCGG
ACTGGTCGACCGGGACGGTCAGACCATCGTGATGGTGACGCACGACCCGGTCGCCGCCTCCCACGCGGACCGGGTGGTGT
TCCTGGCCGACGGTCGGCCCGCGGGCGAGCTGCGCGATCCGACTCCGCGGACGGTCGCCGCCCGGCTGGCCGGCCTCGAG
CCCGTGGCCGAGGCGGCCGAGGCGGCCGAGGCCACGGCAGCGGCCGTGACGCGCGCCAGAGCGGGTGAGCCGCCGAGCGG
GCGTCTGACCGGGCCGGTGGGTGAGCGGCCATGA

Protein sequence : 
MTAAVALRGVSKVYGRRTAAVTALDDVTLAFVCGTFTAVMGPSGSGKSTLLQCAAGLDRPTAGEVFLDGENLARLSENAL
TVLRRDRVGFVFQAFNLVPSLTAELNVALPLRLAGRRPRRREVREVLEAVGLADRGRRRPAELSGGQQQRVAIARALVTR
PSVLFADEPTGALDSTTGREVLTLLRGLVDRDGQTIVMVTHDPVAASHADRVVFLADGRPAGELRDPTPRTVAARLAGLE
PVAEAAEAAEATAAAVTRARAGEPPSGRLTGPVGERP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-31 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 46
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-21 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Franean1_0530 YP_001504896.1 ABC transporter-like protein NC_008702.1.4606598. Protein 7e-34 47
Franean1_0530 YP_001504896.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-37 47
Franean1_0530 YP_001504896.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-34 44
Franean1_0530 YP_001504896.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-36 44