Gene Information

Name : Franean1_4723 (Franean1_4723)
Accession : YP_001508996.1
Strain : Frankia sp. EAN1.pec
Genome accession: NC_009921
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 5637928 - 5638662 bp
Length : 735 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sen:SACE_4601 oxidoreductase, short chain dehydrogenase/reductase family

DNA sequence :
ATGCTTGACGGGAAGGTGGCGGTGATAACCGGCGCTGGATCGGGGATAGCGAAGGCGTCTACAAAGCTCTTCGTGCAGGA
GGGTGCCAAGGTGGTGGCCGTCGATATAAGTGGTGCGGAGAAGGAGACTGCGGCCGAAGTCGGCGAAAATGTCCTTCCCT
TCCACTGCGACGTCTCCGACGAGACGGGCGTTGCTGCGATGTTCGAGGCCACTATCAAGGAGTTCGGACGCGTCGATGCC
GTGCTGAACGTGGCCGGTACCCACGGTACCCGGCCACCTGAGGTCGTCGCCGTCGCCGAGTTCGAGAAGATGACCCAGGT
GAATCTGCGTGGCGTGCTCATTATGACCGAACATGCGATTCCAGCGATGCTCCGCTCAGGCGGCGGCAGCATCGTCAACT
TCTCCTCGATCTCAGCGGTCAACGTCCAGAGCCGGACGTCAATCATGTATGCTGCCGCGAAAGCCGGCACCCATGCCCTC
ACCAAGGCGGTGGCCGTCGAGTACGGTCCCATGGGCATCCGGGCAAACGTCATCGCACCTGGATTTACGCTCACCGATAT
CATGAAAGGGCCGCCTGAGTTGCTGCGCGAGATGAGCTCGAAGGCTGCACTCAAACGGGGCGGTCAACCGCGGGAGCTGG
CCGAGGTAGCGGCTTTTCTGGCCTCGGACCGCGCCTCCTTCGTGACCGGAGTCATCATTCCAGTCGATGGTGGCTGGTCG
GCGCGACTGGCCTAG

Protein sequence :
MLDGKVAVITGAGSGIAKASTKLFVQEGAKVVAVDISGAEKETAAEVGENVLPFHCDVSDETGVAAMFEATIKEFGRVDA
VLNVAGTHGTRPPEVVAVAEFEKMTQVNLRGVLIMTEHAIPAMLRSGGGSIVNFSSISAVNVQSRTSIMYAAAKAGTHAL
TKAVAVEYGPMGIRANVIAPGFTLTDIMKGPPELLREMSSKAALKRGGQPRELAEVAAFLASDRASFVTGVIIPVDGGWS
ARLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 1e-28 41
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 9e-29 41
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 8e-29 41
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 5e-29 41