Gene Information

Name : Franean1_4336 (Franean1_4336)
Accession : YP_001508626.1
Strain : Frankia sp. EAN1.pec
Genome accession: NC_009921
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 5179553 - 5180359 bp
Length : 807 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fal:FRAAL1681 putative ABC transporter, ATP-binding protein

DNA sequence : 
GTGAGGGACGCCGACGCCGACGCCCACGCAACCGGCCCCGGCCCCGGCCGGGCCGATTCCGCGCGACGCGACGCCCACGG
AACGGTCGCGCCGGTGGTGCCCCGCATCGACCTGTGTGGCGTCGGCAAGCACTACGGTGGCGGCGAGGCCGGGGTGACCG
CGCTCGAGGACGTCGACCTGCGGGTCGAGGGCAGCGCGTTCGTGGTCGTCCTCGGGCCGTCCGGGTGCGGCAAGACGACC
CTGCTGAACCTGGTGGGGGCGCTGGACATCCCGACCGCGGGGACCGTCCGACTCGGCGGGGCCGATCTCACCCGGTCCTC
GCAGCGGGAGCGGCGGGAGATCCGGCGGCACACGGTCAGTTTCGTGTTCCAGTCGTTCAACCTGTTCCCGGCGCTCACCG
CCCGGGAGAACGTGCGGTTCGGGGCCGACGTCGCGGGCCGGCCGCGGGCCCGGGAGGTCACCGAGGAGGTCCTCGACGGC
GTCGGGCTGGCGCCCCGCGGCGACCACTTCCCCCACCAGCTCTCCGGCGGGGAGCAGCAGCGGGTGGCGATCGCCCGCGC
GCTCGCCACCGGCAACCCGATCCTGCTCGCGGACGAGCCGACCGGCGAGCTCGACTTCCACACCGGGGTCCAGATCCTCG
TCCTGCTGGAGGCGCAGACGGCCGCCGGCCGCACCGTCGTGGTCGTCACCCACAACCGGGAGATCGCCCGCATCGCGGAC
CGCGTGGTCGAGCTGTCCAGCGGACGGATCGTCGCCGACGGCCCGCCGCCCGGCGGCCGTGTGCCCGTCGGTGACCTGCG
ATGGTGA

Protein sequence : 
MRDADADAHATGPGPGRADSARRDAHGTVAPVVPRIDLCGVGKHYGGGEAGVTALEDVDLRVEGSAFVVVLGPSGCGKTT
LLNLVGALDIPTAGTVRLGGADLTRSSQRERREIRRHTVSFVFQSFNLFPALTARENVRFGADVAGRPRAREVTEEVLDG
VGLAPRGDHFPHQLSGGEQQRVAIARALATGNPILLADEPTGELDFHTGVQILVLLEAQTAAGRTVVVVTHNREIARIAD
RVVELSSGRIVADGPPPGGRVPVGDLRW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-36 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-36 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-36 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Franean1_4336 YP_001508626.1 ABC transporter-like protein NC_008702.1.4606598. Protein 1e-32 47
Franean1_4336 YP_001508626.1 ABC transporter-like protein NC_012469.1.7685735. Protein 9e-37 44
Franean1_4336 YP_001508626.1 ABC transporter-like protein CP001581.1.gene798.p Protein 9e-38 43
Franean1_4336 YP_001508626.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-36 42