Gene Information

Name : Franean1_3846 (Franean1_3846)
Accession : YP_001508144.1
Strain : Frankia sp. EAN1.pec
Genome accession: NC_009921
Putative virulence/resistance : Unknown
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 4569262 - 4570011 bp
Length : 750 bp
Strand : +
Note : PFAM: regulatory protein LuxR; response regulator receiver; KEGG: sen:SACE_7249 two-component system response regulator

DNA sequence :
GTGAACGCCGGCCGCGACGCGGGTGGGAGCGTCGCCCCGCACGCCGGTGGGAACCCCGATCCGGACATCCGGGTGGTCGT
CGCCGACGACCAGGAGATCGTCCGCACCGGCCTGCGGATGATCCTCGACGCCCAGCCGGGCATCGTGGTCGTCGGCGTGG
CGGTGGACGGCCGCCGGGCCGTCGAGCTCGCACGCCGGCTGCGGCCCGACGTCTGCCTGATCGACATCCGGATGCCCGTG
ATGGACGGCATCCAGGCCACGCTCGCCCTTGCCGGGCCGGGGGTGGCTGATCCGCTCGCCGTCGTCGTCATCACCACCTT
CGACCTCGACGAGTACGTCTACGCCGCGTTGCGGGCCGGGGCCCGCGGCTTCCTGCTCAAGGACGCCGGCCCCGATCTGC
TGGCGCAGGCCGTGCACGCCGCCGCCTGCGGCGACGCCCTCATCGCGCCGAACGTCACCGCCCGGCTGCTCGCCACCTTC
GCTGGGAGCGGGCCCGCACCGGTGCCGGCGCAGCCGGTCGAGGCGCTGACCGACCGCGAGGAACAGGTGCTCGCCACCGT
GGCGGGCGGCCGGACGAACAGCGAGATCGCCGCCGATCTGCACATCAGCCTCAGCACGGTCAAAACCCACATCGCCAGCC
TCATGGCGAAGCTCGGCGCCCGCAACCGCGTCGAGATCGCCCTCTGGGCCTACCAGACCGGACGGGTCGACGTCCGCGGG
TCGGGGGCAGGCGGCGCGGGCGGGTGGTAA

Protein sequence :
MNAGRDAGGSVAPHAGGNPDPDIRVVVADDQEIVRTGLRMILDAQPGIVVVGVAVDGRRAVELARRLRPDVCLIDIRMPV
MDGIQATLALAGPGVADPLAVVVITTFDLDEYVYAALRAGARGFLLKDAGPDLLAQAVHAAACGDALIAPNVTARLLATF
AGSGPAPVPAQPVEALTDREEQVLATVAGGRTNSEIAADLHISLSTVKTHIASLMAKLGARNRVEIALWAYQTGRVDVRG
SGAGGAGGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
regB YP_001220830.1 putative two-component system response regulator Not tested chp/tomA region Protein 7e-18 43
DIP0091 NP_938488.1 two-component system response regulator Not tested Not named Protein 6e-17 41
CD241_0088 YP_005124357.1 two-component system response regulator Not tested Not named Protein 3e-17 41