Gene Information

Name : Franean1_3835 (Franean1_3835)
Accession : YP_001508133.1
Strain : Frankia sp. EAN1.pec
Genome accession: NC_009921
Putative virulence/resistance : Unknown
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 4556961 - 4557614 bp
Length : 654 bp
Strand : +
Note : PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rha:RHA1_ro04202 response regulator, two-component system

DNA sequence :
ATGACGGACACGATCAAGGTCGTCGTCGCGGACGACCATCCGCTCATCCGCGCCGGGGTCAGGGCGCTCCTGCTGTCCCT
GGACGACCTGGACCTCGTCGGGGAAGCCGCGGACGGCGACGAGGCCATCAGGATCGCCCGTGCCACCCGGCCCGACGTCG
TCCTCATGGACCTGCACATGCCCGGTACCGACGGCGTCACCGCCACCCGGTCGATCACCGCCGAACTTCCCGACACAGCA
GTGCTCGTGGTCACCATGGTCGAGGACGACGCGTCCGTGTTCGCCGCGATGTGCGCCGGCGCCCGCGGTTACCTCCTCAA
GGGCGCCGACCAAGACGAACTGCGCCGGGCTATCACCGCCGTGGCACACGGCGAGGCAATCTTCGGCTCCCGTGTCGCGG
CACGGGTCCTCGCCCTGCTCGCCCACCCGCCACGTGAGGTCCCGTTCCCGCAGCTCACCGACCGCGAGCGGCAGGTTCTG
GACGAACTCGCCCGCGGCCGCAACAATGCATCGATCGCCCGGGTACTCAATGTCAGTACCCGTACCGTCGCCAACCACGT
GTCCACGATCTTCGCCAAACTCCAGCTCGCAGACCGCGCCGAGGCAATCGTCCGAGCCCGCGAAGCGGGTCTCGGCCACC
GCCAGCCGACCTGA

Protein sequence :
MTDTIKVVVADDHPLIRAGVRALLLSLDDLDLVGEAADGDEAIRIARATRPDVVLMDLHMPGTDGVTATRSITAELPDTA
VLVVTMVEDDASVFAAMCAGARGYLLKGADQDELRRAITAVAHGEAIFGSRVAARVLALLAHPPREVPFPQLTDRERQVL
DELARGRNNASIARVLNVSTRTVANHVSTIFAKLQLADRAEAIVRAREAGLGHRQPT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
regB YP_001220830.1 putative two-component system response regulator Not tested chp/tomA region Protein 4e-22 41