Gene Information

Name : Franean1_3727 (Franean1_3727)
Accession : YP_001508028.1
Strain : Frankia sp. EAN1.pec
Genome accession: NC_009921
Putative virulence/resistance : Unknown
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 4411766 - 4412446 bp
Length : 681 bp
Strand : -
Note : PFAM: regulatory protein LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: sco:SCO7088 two-component system response regulator

DNA sequence :
ATGACTATCCGAGTGCTCCTCGCCGACGACCAGACCCTCCTACGAGCGACCTTCCGGATTCTGATCGACTCGTGCGAGGA
CATGGAAGTCGTCGCTGAAGCCGCAGACGGCCACGAAGCCATCGCAGCGGCCCGTGAACACCACCCGGACGTCGTGCTCA
TGGACATCCGCATGCCCGGCACCGACGGACTCGCCGCCACCGCCGCCATCTGCAGCGACGAAACACTCGCCGCCACGCAC
GTCCTCATCCTCACCACCTTCGAAATCGACGAATACGTCACCCAGGCACTTCACGTCGGAGCAAGCGGCTTCCTCGGTAA
AGACGTCGGAACGGACGAGCTCCTCACCGCCATCCGCACCATCGCCGGCGGCGACGCGCTTCTCTCCCCGGCAGCCACCC
GCGCCCTCATCGCCCGGTTCCTCGCCACCCCCGAACCCACAGCCACCGCCAGGACAAACCCCGCAGTCCTCACGACGCTC
ACCGCCCGCGAACGAGAAGTCATGGTGCTGGTAGCCGAGGGCTACTCGAACCACGACATCGCCCGTCGCCTTGTCATCAG
CCCACTGACCGCCCGCACGCACGTCCACCGAGCCATGACAAAACTCGAAGCCCGCGACCGGGCGCAGCTCGTCGTCATCG
CCTACCAGTCCGGCCTGCTACAAACCACCCCATCGGACTGA

Protein sequence :
MTIRVLLADDQTLLRATFRILIDSCEDMEVVAEAADGHEAIAAAREHHPDVVLMDIRMPGTDGLAATAAICSDETLAATH
VLILTTFEIDEYVTQALHVGASGFLGKDVGTDELLTAIRTIAGGDALLSPAATRALIARFLATPEPTATARTNPAVLTTL
TAREREVMVLVAEGYSNHDIARRLVISPLTARTHVHRAMTKLEARDRAQLVVIAYQSGLLQTTPSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
regB YP_001220830.1 putative two-component system response regulator Not tested chp/tomA region Protein 2e-32 47