Gene Information

Name : Franean1_3710 (Franean1_3710)
Accession : YP_001508013.1
Strain : Frankia sp. EAN1.pec
Genome accession: NC_009921
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 4393141 - 4393929 bp
Length : 789 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mxa:MXAN_1754 oxidoreductase, short-chain dehydrogenase/reductase family

DNA sequence : 
ATGCGTCTGAAGGACAAGGTCGCGGTCATCACGGGCGCAGGCTCGGGAATCGGCAAGGCGATAGCTCACCGGTTCGCCGC
CGAGGGGGCGAGCGTCGTCTGCGCCAGCGTCAGCGGCCGCGCGGTCGACGTCGCCGCCGAGATCGGCGACGGGGCGCTCG
GGGTGAAGGCGGATGTCAGCGACGAGGCGGATGTCCGGCGCATGATCGGGGCCGCCGAGGAGGCGTTCGGCCGGATCGAC
ATCCTGGTGAACAACGCCGGGTTCGGCGGCAAGTTGAAGCCGATACACGAGCAGAGTACGGAGGACTGGGACCGCGTTCA
CGGGGTGAATCTGCGGGGCGTCTTCTTCTGCATGAAGTACGGCATCATGTCGATGCGCCGGACGGGTGGCGGCTCCGTCG
TGAACGTCTCGTCGACGACGGCGGTCATCGGCTGGAAGCACCACGGGATCTACGGGGCGGCCAAGGCCGGTGTGAACCAG
CTGACCAGGGTCGCCGCCCTCGACTACGCCGACGACAACATCCGGGTGAACGCGGTGTGCCCGGGCACGATCTGGACCGG
CCTCGTGCAGCTGTCCAAGGAGCACCCGGAGCCGCCGCCGGGGGTGTTCCGCCTCCCCGGGATCCCGATGGACCGCTGGG
GCCTGTCCGACGAGATCGCCGCGGCGACCCTGTTCCTGGCCAGCGACGAGGCGTCCTACGTCACGGGCGTGCTGATGCCG
GTGGACGGCGGCTACTCCGTCGGCTTCTCCGGGATGGGCGCCGAGAAGTCGGGCCGGCCCACCGCCTGA

Protein sequence : 
MRLKDKVAVITGAGSGIGKAIAHRFAAEGASVVCASVSGRAVDVAAEIGDGALGVKADVSDEADVRRMIGAAEEAFGRID
ILVNNAGFGGKLKPIHEQSTEDWDRVHGVNLRGVFFCMKYGIMSMRRTGGGSVVNVSSTTAVIGWKHHGIYGAAKAGVNQ
LTRVAALDYADDNIRVNAVCPGTIWTGLVQLSKEHPEPPPGVFRLPGIPMDRWGLSDEIAAATLFLASDEASYVTGVLMP
VDGGYSVGFSGMGAEKSGRPTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 7e-31 43
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 6e-31 43
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 4e-31 43
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 2e-32 42
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 9e-31 42