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Name : Franean1_3553 (Franean1_3553) Accession : YP_001507859.1 Strain : Frankia sp. EAN1.pec Genome accession: NC_009921 Putative virulence/resistance : Unknown Product : ABC transporter-like protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 4214490 - 4216325 bp Length : 1836 bp Strand : + Note : PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: nfa:nfa28010 putative ABC transporter DNA sequence : ATGAACGAAGATCGAGGAGCGCTGGCGGCGCTGCTGCGGCCCATCCGGGGGCGGCTGTGGCTCGCCACCGCGGCGCAGGG CGTCTCCGCGGCCGTGAGCGTCGTGCCCTTCATCGCCGCCGCGGAGCTGGGGCGCGTCCTGCTCGACGACGGCCCGGTCG ATCACGGGCGCGCCTGGGCGATCACCTGGGTCGGCGTCGCGGCCCTGTTCGCGCGGCTGGTCCTCCTGGCCGCGGCCGGC GGGGTGAGCCACTTCGCGGACAACCGGCTGCAGCTCGACATCCGCCGGCGGATCGTCGGCCACCTCGGCCAGGTGCCGCT GGGCTGGTTCTCCGAACGCAACTCCGGCACGGTCAAAAAGGCCGTCCAGGACGACGTGACGACCATGCACCACCTGGTCG CGCACTCCCGGCTGGAGATCACCGCGGCGACCGTCGTGCCGTTGACGACCCTGGCCTACCTGTTCTGGGTCGACTGGCGG ATGGCGCTGGTCACCCTCGCTCCGCTGATCGTCGGCCTCTACTTCTACGGGCGGAACCTCGCGGCCGTCGGCGCCCAGCT CCAGCCGTTCGACGAGGCCACGCGGGCCATCAGCGCGAGCACGGTCGAGTTCGTCGACGGCATCGCCGTCGTGAAGATCT TCGGCCGGGCGCGCGGCGCGCACGAGCGCTTCACCCGGGCGGCCGACGACTACTCGACCTTCTTCAAGGGCTGGGTCACC TCGACGATCGGCCTGCGCGCGATCTCGGAGATCCTGCTCTCCCCGGTGGTGGCGCTGCTCACCGTCCTCGTCGGCGGCGC GCTGCTCGTCACGAAGGCCGACATGGCGCCCGTCGACCTGCTGCCGTTCGCGCTGCTCGGTGCTGGCCTGGCCGCGCCGA TCCTCGCGCTCAGCTACGGGATCTACAACATGCGCACCGCCCACCAGGCGGCCGCGAACGTGACGGGCGTGCTGGCCGTG CCCCCGCTGCCCGTCGCCACCGAGCCCGACGTGCCCGCCGGCAACGATGTCGTCTTCGAGGACGCCCGGTTCTCCTACGA CGGGGAGACCGAGGTCCTACGGGGCATCGACCTGACCCTGCGCCCCGGGACGATCACCGCGCTGGTCGGGGCGTCGGGCT CCGGCAAGTCGACCCTCGCGTCGCTGGTCCCGCGCTTCGGTGACGTCACCGGCGGCGCGATCCGGGTGGGCGGGGTCGAC CTGCGCGACGTCGCCCCCGACGAGCTGTACCGCCGGGTCGCCTTCGTCTTCCAGGACACCCACCTGCTGCGTGACTCGAT CGCCGACAACATCCGGCTGGCCCGGCCGGAGGCCGATCTCGACGAGGTGCGCGCCGCCGCCCAGGCCGCGCGCATCGACG GCCGCATCCGCGAGCTGCCCCGGGGCTACGACTCCGTCATCGGCGAGGACGGCCAGCTCTCGGGCGGCGAGGCGCAGCGG GTCGCGATCGCCCGCGCCCTGCTCGCTGACACCCCCGTGATCGTGCTGGACGAGGCGACGGTGTTCACCGATCCCGAGGC CGAGGCCGACATCCAGGACGCTCTCTCCGAACTGACCAGGGAGAAGACGGTGCTGGTCATCGCCCACCGGCTCGCCACGA TCGTCGCCGCCGACCAGATCGTCGTTCTCGATGACGGCGCGATCGCCGAGCGGGGCACCCACACCGAGCTGGTCGCGGCG GGCGGTGTCTACGCCCGGATGTGGACGGCGCACGAGCGCGCCGCCGACCCGCACGCACGTCCCGGCCCCGCCATCCCGGC GCCCGGCGTTCGCGGTGCCCCTGGCGGCGTTCGCGGTGCCGCGGGCGTGCTGACCGGAACGGAGGAGGCCCGGTGA Protein sequence : MNEDRGALAALLRPIRGRLWLATAAQGVSAAVSVVPFIAAAELGRVLLDDGPVDHGRAWAITWVGVAALFARLVLLAAAG GVSHFADNRLQLDIRRRIVGHLGQVPLGWFSERNSGTVKKAVQDDVTTMHHLVAHSRLEITAATVVPLTTLAYLFWVDWR MALVTLAPLIVGLYFYGRNLAAVGAQLQPFDEATRAISASTVEFVDGIAVVKIFGRARGAHERFTRAADDYSTFFKGWVT STIGLRAISEILLSPVVALLTVLVGGALLVTKADMAPVDLLPFALLGAGLAAPILALSYGIYNMRTAHQAAANVTGVLAV PPLPVATEPDVPAGNDVVFEDARFSYDGETEVLRGIDLTLRPGTITALVGASGSGKSTLASLVPRFGDVTGGAIRVGGVD LRDVAPDELYRRVAFVFQDTHLLRDSIADNIRLARPEADLDEVRAAAQAARIDGRIRELPRGYDSVIGEDGQLSGGEAQR VAIARALLADTPVIVLDEATVFTDPEAEADIQDALSELTREKTVLVIAHRLATIVAADQIVVLDDGAIAERGTHTELVAA GGVYARMWTAHERAADPHARPGPAIPAPGVRGAPGGVRGAAGVLTGTEEAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| irp2K | YP_005163491.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 1e-79 | 43 |
| irp2K | YP_005134503.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 1e-79 | 43 |
| CDPW8_2175 | YP_005143723.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 6e-75 | 41 |
