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Name : Franean1_3413 (Franean1_3413) Accession : YP_001507721.1 Strain : Frankia sp. EAN1.pec Genome accession: NC_009921 Putative virulence/resistance : Virulence Product : RNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3344 EC number : - Position : 4042777 - 4044030 bp Length : 1254 bp Strand : + Note : PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: pde:Pden_4539 RNA-directed DNA polymerase (reverse transcriptase) DNA sequence : GTGAGTGGACCAGCATCGCGGGGAAAGTCGTTTGAGATCCCCAAACAGCTGGTGTGGGATGCCTGGCTGAAAGTGAAGGA AAACGGTGGGGCACCGGGGCCCGACGGAGTGACGGTCGAGCAGTTCGAGGCGAACGTGAAGGATCGCCTGTACGTGCTGT GGAACCGCATGTCGTCGGGGTCGTACTTCCCCGGACCCGTCGGAGCGGTGGAGATCCCGAAGAAAGGTGTGAAAGGAGGA GCAAGAACCCTCGGCATTCCCAATGTAGTAGATCGCGTAGCGCAGACGGTGCTAAAGCTGGCTCTGGAGCCGAAGGTCGA GCCGGTGTTCCACCGGGACTCGTACGGCTACAGACCAGGCCGTTCGCAGCGCCAGGCGCTCGAGGTCTGCCGGAAGCGGT GCTGGTCGCACGACTGGGTCGTTGACTTGGACGTGCGGAAGTTCTTCGACACCGTGCCGTGGGAAAAGCTGCTGAAGGCG GTGGCGTACCACACGGACCAGAAATGGGTCCTGATGTACGTGGAACGCTGTCTGAAAGCGCCGACGAAGCATGCCGACGG AACCCTGCAAGAGAGAACCATGGGCACAGTCCAGGGTGGCCCATTCTCCCCGCTGGCGGCTAACATCTATCTGCACTGGG GCCTTGACGCCTGGATGGCGCGCGAGTTCCCGACCGTTCCATTCGAGCGGTGGGCGGACGATGTTGTGTTTCACTGTGTG AGCCTGGAACAGGCCAGGGAAGTGCGGGACGCGGTGGTGGCAAGGCTTGTCGAAGTCGGGTTGGAAGCTCACCCCGACAA GACCCGGATCGTGTACTGCAAGGACAGCAACCGAGGTGGCGACTATGAAAACACGTCGTTCACGTTCCTGTCGTATACCT TCAGGCCACGAGTGGCATGGAACGGCACCCAGAAGAAACGCTTCACCAGCTTCATCCCGGGTGCCGCGCCGGATCGGGTG GCCTCGTTCAGCCGCGAAATGCGCGACCTGAGGCTGCACAGGCGAACGAACCTGACACTGGATCAACTCGCCGCGGACAT CAACCCGAAAGTGGCGGGTTGGCTAGAATATTTCACCATGTTCTACCCGAGCGTGGTGCTACCCATCGGCACGCGCATTG ACAGCCATCTCGTGCGCTGGGCGAGGAAGAAGTACAAACGGCTGACACGAAGTGAGCGTAGGGCGTGGGCATGGCTCAAG GGAGTCCGGGAACGGTCCCCTGACCTGTTTGCGCACTGGGCGTTGCGGTACTGA Protein sequence : MSGPASRGKSFEIPKQLVWDAWLKVKENGGAPGPDGVTVEQFEANVKDRLYVLWNRMSSGSYFPGPVGAVEIPKKGVKGG ARTLGIPNVVDRVAQTVLKLALEPKVEPVFHRDSYGYRPGRSQRQALEVCRKRCWSHDWVVDLDVRKFFDTVPWEKLLKA VAYHTDQKWVLMYVERCLKAPTKHADGTLQERTMGTVQGGPFSPLAANIYLHWGLDAWMAREFPTVPFERWADDVVFHCV SLEQAREVRDAVVARLVEVGLEAHPDKTRIVYCKDSNRGGDYENTSFTFLSYTFRPRVAWNGTQKKRFTSFIPGAAPDRV ASFSREMRDLRLHRRTNLTLDQLAADINPKVAGWLEYFTMFYPSVVLPIGTRIDSHLVRWARKKYKRLTRSERRAWAWLK GVRERSPDLFAHWALRY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13526.1 | reverse transcriptase | Not tested | PAGI-7 | Protein | 8e-95 | 50 |
| unnamed | CAD33771.1 | putative reverse transcriptase | Not tested | PAI I 536 | Protein | 2e-72 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Franean1_3413 | YP_001507721.1 | RNA-directed DNA polymerase | VFG1512 | Protein | 1e-72 | 41 |
