Gene Information

Name : Franean1_3130 (Franean1_3130)
Accession : YP_001507447.1
Strain : Frankia sp. EAN1.pec
Genome accession: NC_009921
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 3685020 - 3685856 bp
Length : 837 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: psa:PST_2900 probable ABC transporter, ATP-binding component

DNA sequence :
ATGACGACGGACTTAGGCCCGCTCAGGGTCGAGACCCGAGGGGCGACGAACGCCAACGTGTCGGCAGCGACCTTGCAGCA
TGTGAACATGACCTATCCGGCGCGTCGCGGGGAGAACGTCCTGGCACTGAAGGACGTATCGCTGGACATCGGCCCGCAAG
AATTCGTGACCATCATCGGACCGAGCGGATGCGGCAAGAGCACGCTACTTAAGATCATCGCTGGTCTGGTGCGTCCCTCG
TCCGGAAAGGTGTCGCTGGGAAGTTCCGAGGTCACCGGACCTTCCGCCGACGTCGGGCTGGTGTTCCAACAGCCCGTCCT
GCTGCCCTGGAGGAACGTCAGCAAGAACGTCAGCCTTCCACTGGAGGTCCTCAAAGGCGCCAAGAAGGGACGTGTCAACC
GTCACGCCCCCGTCGAGCAGCTACTCGGTATTGTCGGTCTAGGAAAGTACGGCGAGCACTACCCGCACGAGTTGTCGGGT
GGGATGCAGCAGCGGGTCAGCATCGCGCGGGCACTCGTCCACGACCCGGACGTCCTGCTGATGGACGAGCCGTTCGGTGC
CCTTGATGCGTTGACTCGGGACCAGATGTCGTTCGAGCTGATGCGCATCTGGAACGAGCGGTCGAAGACCGTGGTCTTCG
TGACGCACAGCATTCCCGAGGCGATCTTGTTGGCTGACCGGGTGGTCGTCATGTCCAAGTCTCCCGGGGAGATCGCCGAG
ATCATCGACATCAATCTGCCCCGCCCTCGCCGCAACGAAATGATTAATACCCCCGAGTTTGGGGCGTACGTCCAGCGTGC
ACGTGCGTTGCTCAACGCTGAGACCACTGCTCACTGA

Protein sequence :
MTTDLGPLRVETRGATNANVSAATLQHVNMTYPARRGENVLALKDVSLDIGPQEFVTIIGPSGCGKSTLLKIIAGLVRPS
SGKVSLGSSEVTGPSADVGLVFQQPVLLPWRNVSKNVSLPLEVLKGAKKGRVNRHAPVEQLLGIVGLGKYGEHYPHELSG
GMQQRVSIARALVHDPDVLLMDEPFGALDALTRDQMSFELMRIWNERSKTVVFVTHSIPEAILLADRVVVMSKSPGEIAE
IIDINLPRPRRNEMINTPEFGAYVQRARALLNAETTAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-43 46
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-28 41
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Franean1_3130 YP_001507447.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-26 41