Gene Information

Name : Franean1_3089 (Franean1_3089)
Accession : YP_001507407.1
Strain : Frankia sp. EAN1.pec
Genome accession: NC_009921
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3647182 - 3648072 bp
Length : 891 bp
Strand : +
Note : PFAM: Integrase catalytic region; KEGG: mjl:Mjls_2863 integrase, catalytic region

DNA sequence :
GTGACCGACAAGTACGAACTGATCGCCGCGGAGAAGGACAACTACCCGGTCACCAAGATGTGCCAGTGGCTCGTCGTGTC
GACATCCGGTTTCTACGACTGGCACCGCAGGCCCGCGTCGACCCGGACCCGTCGGCACACCACCCTCGACACCCACGTCC
GGGCGGTGTTCGCCGCCTCCCGCCAGACCTACGGCGCCCGGCGGATCGCCGCCGCCCTGACCGCCTCCGGCCTGCGCGTC
TCCGTCCGCCTCGCCCGACGGATCATGCGCCGCGCAGGGCTGGAAGCCTGCCAGCCCAGGGCCTACCGCCGCACCACCAT
CCCCGGCCAGGCCCCGGCGCCCGCCGACCACGTCCGCCGCGACTTCACCGCCACCCGCCCCGGCGAGAAGCTCATCGGGG
ACATCACCTATATCCGCACCGGCGAAGGATGGCTCTACCTCGCCACCGTCATCGACTGCTACTCCCGTAAAGTCGCCGGC
TGGTCGATGGCCACCCACCTGCGCACCGAGCTCATCATCGACGCGTTCACCATGGCCGCCTCCCGCACAACCCTCGCACC
GAACGCGCTTTTCCACTCCGATCGTGGCGCCCAATACACGTCGGATGCCTACCATCGCGTCCTGAAACGCCATGGAGTAC
GCCCGTCGGTCGGCGCCACCGGAGTCTGCTGGGACAATTCCGCTGCAGAGTCGTTCTTCGGAACGCTCAAGAACGAACTC
GTGTACCGGGAAAACTACCCAACCCGCCGCGCCGCACGTACCGCGATCGCCGAATACATCGAGGTCTTCTACAACCGGCA
GCGGCTCCACTCCACTCTCGGCTACCGCACTCCCGAAAACATCGAGCGCGCATACCACTCAACCCAGAACGAGGTGATAG
AAGCAGCATAA

Protein sequence :
MTDKYELIAAEKDNYPVTKMCQWLVVSTSGFYDWHRRPASTRTRRHTTLDTHVRAVFAASRQTYGARRIAAALTASGLRV
SVRLARRIMRRAGLEACQPRAYRRTTIPGQAPAPADHVRRDFTATRPGEKLIGDITYIRTGEGWLYLATVIDCYSRKVAG
WSMATHLRTELIIDAFTMAASRTTLAPNALFHSDRGAQYTSDAYHRVLKRHGVRPSVGATGVCWDNSAAESFFGTLKNEL
VYRENYPTRRAARTAIAEYIEVFYNRQRLHSTLGYRTPENIERAYHSTQNEVIEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 5e-40 41
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 5e-40 41