Gene Information

Name : Franean1_3047 (Franean1_3047)
Accession : YP_001507365.1
Strain : Frankia sp. EAN1.pec
Genome accession: NC_009921
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3582011 - 3582889 bp
Length : 879 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aau:AAur_0389 ferric enterobactin transport ATP-binding protein

DNA sequence : 
ATGAACACCAACACCATCACCGATCTTGCGGAGGCGAGAGACGTACCCACTCCTGCTCCGCCGCCCGGCGGCTCACGCCT
CCGCGTGGAGTCGGCGACGATCGGTTACGACAAGCGCATCATCAGCGAGGGCTTGTCGGTGTCCATTCCGGACGAGTCGT
TCACAGTCATCGTGGGCCCGAACGCGTGCGGGAAGTCCACTCTGCTGCGCGGCCTGTCGCGGCTGTTGAAGCCGTCCGCG
GGTCAGGTGGTCCTCGACGGTGTAGCTATCCAGTCGTACAAGACGAAGGAGGTGGCGCGGCGGGTCGGCCTGCTGCCGCA
GACCTCGATCGCCCCGGACGGGATCACCGTAGCCGACCTGGTGGCTCGGGGCCGGTATCCGTATCAGGGGTTCATCCGGC
TGTGGACCGAGGCCGACGAGCGGGCCGTAGTCAGGGCGATGGACCAGACCGCGGTCACCGACCTGTCGGGCCGCTTGGTG
GACGAGTTGTCGGGAGGCCAGCGACAGCGGGTGTGGGTGGCGATGGCGCTCGCGCAGCACACCAGCATCCTGCTGCTGGA
CGAGCCGACCACCTTCCTCGACATCACCCATCAGATCGAACTGATGGAGCTGTTCACCGACCTGCACCACGTCGGCCACA
CCCTGGTCGCCGTGCTGCACGACCTGAATCATGCTGCTCGCTACGCCACGCACTTGATCGCCATGAAGGACGGCGCCATG
GTCGCCGAGGGGCCACCGTCGGAGATCGTGACGGCCGAGCTGGTCGAAGAGGTGTTCGGTTTGCGCTGTCTGGTGGTGCC
CGATCCGGTAGCGGGCACTCCTCAGGTGGTGCCGCTGGGCCGTGACCGCGGTGGCGAAGGCGTGCGGGAGGGCCGTTGA

Protein sequence : 
MNTNTITDLAEARDVPTPAPPPGGSRLRVESATIGYDKRIISEGLSVSIPDESFTVIVGPNACGKSTLLRGLSRLLKPSA
GQVVLDGVAIQSYKTKEVARRVGLLPQTSIAPDGITVADLVARGRYPYQGFIRLWTEADERAVVRAMDQTAVTDLSGRLV
DELSGGQRQRVWVAMALAQHTSILLLDEPTTFLDITHQIELMELFTDLHHVGHTLVAVLHDLNHAARYATHLIAMKDGAM
VAEGPPSEIVTAELVEEVFGLRCLVVPDPVAGTPQVVPLGRDRGGEGVREGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-62 50
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 4e-65 50
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 4e-65 50
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 8e-53 47
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-64 47
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 6e-64 47
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 5e-64 47
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-64 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-52 45
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-53 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-53 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-53 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-53 43
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 1e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Franean1_3047 YP_001507365.1 ABC transporter-like protein BAC0164 Protein 5e-53 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Franean1_3047 YP_001507365.1 ABC transporter-like protein VFG0925 Protein 7e-79 61
Franean1_3047 YP_001507365.1 ABC transporter-like protein VFG1042 Protein 4e-53 47