Gene Information

Name : Franean1_2874 (Franean1_2874)
Accession : YP_001507203.1
Strain : Frankia sp. EAN1.pec
Genome accession: NC_009921
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3316
EC number : -
Position : 3388572 - 3389213 bp
Length : 642 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: fal:FRAAL2496 putative transposase

DNA sequence :
GTGATCGTCCTCGCTGTCCGCTGGTACCTGCGGTTCGCGCTGTCGTACCGGGACGTCGAGGAGCTCCTCGCCGAACGCGG
CCTCGAGGTTGATCACGTCACGGTGTACCGGTGGGTGCAGCGCTTCACGCCCCTGCTGGTCGAGGCGGCCCGGCCGTGTC
GTCACCGGCCTGGGGATAGGTGGTTCGTCGACGAGACCTACGTCAAGGTCTCCGGCCGGTGGACGTACCTGTACCGGGCG
GTCGACCAGCATGGCCAGGTCATCGACGTCCTGGCCAGCGAACGACGCGACCAGGCCGCCGCTCGGCGCTTCTTCATTCG
GGCGCTGACGCAGGGGCGACGGCCGGTCGAGGTCACGACCGACAAGGCGTCGGTCTACCCGCGGATCCTCGACGAGCTGC
TCCCCGATGCCTGCCACGTCGACGCCGCTCGGGAGAACAATCGTGTTGAAGCCGACCACGGCCGGTTGAAAGCGTGGCTG
CGGCCGATGCGTGGGCTGAAACGCCTGCGGTCCGTCCAGACCGTCAGCGCCGGACACGCTCTGATCCAGAACATCCGCCG
CGGCCACTACGAACTCGGGACCGACAGCAGTCCGCACCTGCGGCTGGAAGCCGCGTTCACCGAACTCGCCGCAGCCGTCT
GA

Protein sequence :
MIVLAVRWYLRFALSYRDVEELLAERGLEVDHVTVYRWVQRFTPLLVEAARPCRHRPGDRWFVDETYVKVSGRWTYLYRA
VDQHGQVIDVLASERRDQAAARRFFIRALTQGRRPVEVTTDKASVYPRILDELLPDACHVDAARENNRVEADHGRLKAWL
RPMRGLKRLRSVQTVSAGHALIQNIRRGHYELGTDSSPHLRLEAAFTELAAAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA6100 ACN81001.1 transposase Not tested AbaR5 Protein 3e-31 43
tnpA6100 ACN62081.1 TnpA6100 Not tested SGI1 Protein 2e-31 43
tnp6100 ACX47960.1 tnp6100 Not tested SGI1 Protein 2e-32 43
tnpA6100 AGF35032.1 IS6100 transposase Not tested SGI1 Protein 2e-31 43
tnpA6100 AGK07018.1 IS6100 transposase Not tested SGI1 Protein 2e-32 43
tnpA6100 AGF35067.1 IS6100 transposase Not tested SGI1 Protein 2e-31 43
tnpA6100 AGK07076.1 IS6100 transposase Not tested SGI1 Protein 2e-32 43
tnpA6100 AGK06937.1 IS6100 transposase Not tested SGI1 Protein 2e-31 43
tnpA6100 AGK06983.1 IS6100 transposase Not tested SGI1 Protein 2e-31 43
CDBH8_0916 YP_005160008.1 transposase-like protein Not tested Not named Protein 3e-31 43
tnpA6100 AGK07042.1 IS6100 transposase Not tested SGI1 Protein 2e-31 43
tnpA6100 AGK07113.1 IS6100 transposase Not tested SGI1 Protein 2e-31 43
tnpA AAG03007.1 transposase Not tested SGI1 Protein 2e-31 43
tnp6100 ACS32049.1 Tnp6100 Not tested SGI2 Protein 2e-31 43
tnpA6100 AGF34993.1 IS6100 transposase Not tested SGI1 Protein 2e-31 43
tnpA CAJ77056.1 Transposase Not tested AbaR1 Protein 2e-31 43