|
Name : Franean1_0229 (Franean1_0229) Accession : YP_001504602.1 Strain : Frankia sp. EAN1.pec Genome accession: NC_009921 Putative virulence/resistance : Virulence Product : ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 279463 - 282075 bp Length : 2613 bp Strand : - Note : PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: fal:FRAAL6643 ATP-dependent protease, HSP 100, part of multi-chaperone system with DNA sequence : ATGAACGCTGACCGTCTCACCGCCCGCTCGCAGGAGGCTCTGTCCTCCGCGATCAGCCGTGCCACCGGCGACGGATCGCC GCTCGTCGACCCGCTGCACCTGCTGACCGCCCTGCTCGAGGCGCCCGACGGTGTCGGTGCCGCCCTGCTGGAGGCCGTCG GCACCCCGGCGGCGGACATCCGCTCCCGGGCGGAGGCCGCGGTGGGCCGGCTCCCCCGCGCCGCCGGGGCCAACGTGGCG CCGCCGCAACTGTCCCGGCAGCTCGTCGCCGTCCTGAACAACGCCGAGCGCCAGGCCGCCCGGCTCGGCGATGAGTACAC CTCGGTCGAGCACCTGGTCGTGGCGCTCGCGGAGGAGGGCGGGGAGGCGTCCCGCATCCTCGCCGAGGCGGGCGCGACCC CGGACGCCCTGCGCGGCGCGTTCGACCGCGTCCGCGGCGGCGCCCGCCGCGTCACCAGCCGGGATCCGGAGGGGGCCTAC CGGGCGCTCGAGAAGTACTCCATCGACCTCACCGCGCGGGCCCGCGACGGCAAGCTCGACCCGGTGATCGGCCGCGACAC CGAGATCCGCCGGGTCGTGCAGGTTCTCTCCCGGCGCACGAAGAACAACCCGGTCCTGATCGGCGAGCCCGGCGTCGGCA AGACGGCGATCGTCGAGGGGCTCGCGCTGCGGGTGGCCGCGGGTGACGTCCCGGAGTCGCTGCGCGGGCGGCGCATCGTC TCGCTCGACCTCGGCTCGATGGTCGCCGGCTCCAAGCTGCGCGGCGAGTTCGAGGAACGGCTGACCTCGGTGCTCACCGA GATCCGCGAGGCCGAGGGCCAGATCATCACCTTCATCGACGAGCTGCACACCGTCGTCGGCGCCGGCGCGGCCGAGGGCG CGATGGACGCCGGCAACATGCTCAAGCCGATGCTCGCCCGCGGTGAGCTGCGCATGATCGGCGCGACGACGCTGGACGAG TACCGCACCCGCATCGAGAAGGACCCGGCGCTGGAGCGCCGCTTCCAGCCCGTGATGGTCGGGGAGCCGTCCGTGGAGGA CACGATCGGCATCCTGCGCGGGCTCAAGGAGCGTTACGAGGTCCACCACGGGGTGCGGATCACCGACTCGGCGCTGGTGG CCGCGGCCACCCTGTCCGACCGGTACGTCACCGCCCGGTTCCTCCCCGACAAGGCGATCGACCTGATGGATGAGGCGGCG TCCCGGCTACGGATGGAGATCGACAGCCGGCCGGTCGCCGTCGACGAGCTCGAGCGGGCCGTGCGCCGTCTCGAGATCGA GGACATGGCGCTGTCGAAGGAGAACGACGACGCGTCCCGGGAACGGCGCGACCGGCTGCAGCGCGAGCTGGCGGAGAAGC GCGAGGAGCTCTCCGCGCTGACCGCGCGGTGGCAGCGGGAGAAGAACTCCATCTCCGAGGTCCAGAAGATCAAGGAGGAG CTGGAGAACGCCCGCCGCGCCGCCGAGATGGCCGAGCGCGACCTCGACCTCGCCAAGGCCGGTGAGCTGCGGTACGGCAC GATCCCGACGCTGGAGAAGCGGCTCGCCGAGGCGACCGGCGCGCTCGCCGGATCGGACTCGCCCGGCGGGGCGATGCTCA GCGAGGAGGTCGGTCCCGACGACGTCGCCGAGGTCGTCGCCTCGTGGACGGGCATCCCCGCCGGCCGCATGCTCGAGGGC GAGACGAGCAAGCTCCTGCGCATGGAGACGGAGCTGCACCGTCGCGTGATCGGGCAGGACGAGGCCGTGCGCACCGTGGC GGACGCCGTCCGCCGCGCGCGGGCCGGCATCGCCGACCCGGACCGGCCGACCGGGTCGTTCCTCTTCCTCGGGCCGACGG GTGTGGGCAAGACGGAGCTGGCCAAGGCGCTCGCCGACTTCCTGTTCGACGACGAGCGGGCGGTCGTGCGCATCGACATG AGCGAGTACGCCGAGAAGCACTCGGTGGCGCGGTTGATCGGCGCGCCTCCCGGCTACGTCGGCTTCGAGTCCGGCGGCCA GCTCACCGAGGCGATCCGGCGCCGCCCGTACAGCGTGATCCTGCTCGACGAGGTCGAGAAGGCGCACCCGGACGTCTTCG ACGTGCTGCTCGCCGTACTCGACGACGGCCGGCTGACCGACGGCCAGGGCCGCACGGTCGACTTCCGGAACACCATCCTG ATCCTGACCTCGAACCTGGGGTCGGTCTACATCGCCGACCCGACCCTGCCCCCGCAGGTCCGCCACGATTCGGTGATGGT CGCCGTGCGCGACGCCTTCAAGCCGGAGTTCCTGAACCGGCTCGACGACGTGCTGGTCTTCGAGCAGCTCGGCCGGGACG ATCTGACGAAGATCGTCGACATCCAGATCGACCGGCTGCGCAGGCGGCTGGCCGACCGCCGGATCTCCCTCGAGGTGACC GACGCCGCCAAGGTCTGGCTCGCGGACGCCGGCTACGACCCGGTGTACGGGGCGCGGCCGCTGCGCCGCCTGGTGCAGAC CTCGATCGGCGACCAGCTCGCCCGCGAGCTGCTGGCCGGCCAGATCAGGGACGGCGACGGGGTCGTGGTCGACGTGGACG GGCAGCGCTCGGCGCTGAGCGTCCACTCCGCGGCCCGCGCGCAGGCCATCTGA Protein sequence : MNADRLTARSQEALSSAISRATGDGSPLVDPLHLLTALLEAPDGVGAALLEAVGTPAADIRSRAEAAVGRLPRAAGANVA PPQLSRQLVAVLNNAERQAARLGDEYTSVEHLVVALAEEGGEASRILAEAGATPDALRGAFDRVRGGARRVTSRDPEGAY RALEKYSIDLTARARDGKLDPVIGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRVAAGDVPESLRGRRIV SLDLGSMVAGSKLRGEFEERLTSVLTEIREAEGQIITFIDELHTVVGAGAAEGAMDAGNMLKPMLARGELRMIGATTLDE YRTRIEKDPALERRFQPVMVGEPSVEDTIGILRGLKERYEVHHGVRITDSALVAAATLSDRYVTARFLPDKAIDLMDEAA SRLRMEIDSRPVAVDELERAVRRLEIEDMALSKENDDASRERRDRLQRELAEKREELSALTARWQREKNSISEVQKIKEE LENARRAAEMAERDLDLAKAGELRYGTIPTLEKRLAEATGALAGSDSPGGAMLSEEVGPDDVAEVVASWTGIPAGRMLEG ETSKLLRMETELHRRVIGQDEAVRTVADAVRRARAGIADPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERAVVRIDM SEYAEKHSVARLIGAPPGYVGFESGGQLTEAIRRRPYSVILLDEVEKAHPDVFDVLLAVLDDGRLTDGQGRTVDFRNTIL ILTSNLGSVYIADPTLPPQVRHDSVMVAVRDAFKPEFLNRLDDVLVFEQLGRDDLTKIVDIQIDRLRRRLADRRISLEVT DAAKVWLADAGYDPVYGARPLRRLVQTSIGDQLARELLAGQIRDGDGVVVDVDGQRSALSVHSAARAQAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-98 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Franean1_0229 | YP_001504602.1 | ATPase | VFG2084 | Protein | 6e-101 | 43 |
