Gene Information

Name : Franean1_1770 (Franean1_1770)
Accession : YP_001506114.1
Strain : Frankia sp. EAN1.pec
Genome accession: NC_009921
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 2127403 - 2128827 bp
Length : 1425 bp
Strand : -
Note : TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: fal:FRAAL5161 glutamine synthetase

DNA sequence : 
ATGTTCACAAACGCCGACGACGTGCTCCGTTATATCCGGGACGAAGGCGTTCAGTTCATTGACGTACGATTCTGTGACCT
TCCCGGGGTGATGCAGCACTTCACAATCCCCACGGAGGTTTTCTCCGAGTCGGTCTTCAGCGATGGGCTCATGTTCGACG
GATCGTCGATCCGCGGATTCCAGGCGATTCATGAATCTGACATGCTGCTTCTTCCGGACCCTCGGACGGCGTTTGTCGAC
CCGTTCCGTGAGCACCCCACCCTCGCAATGACGTTCTTCATCCACGACCCGATCACCAAGGAGCAGTACTCGCGCGACCC
GCGCAACATCGCCAAGAAGGCCGAGGCCTACCTGCGCGGCACGGGGATCGCCGACACCGCCTACTTCGGCCCCGAGGCCG
AGTTCTACATCTTCGACGACGTCCGCTACGACTACAACCCCTACGGGTCGATGCACGCGGTCGACTCGGTGGAGGCCGCG
TGGAACACCGCGCGGAAGGAGGAGGGCGGCAACCTCGGATACAAGCCCCGGTTCAAGGGCGGCTACTTCCCTGTGCCGCC
GACGGACCACTTCACCGACCTGCGCTCGGAGATGACCCGGGTGCTCTTCGAGGTCGGCATCACCGTCGAGATGCAGCACC
ACGAGGTCGGCACCGCCGGCCAGGCCGAGATCGACATCAGGTACGACACGCTGCTCAAGACGGCCGACAACCTGATGCTC
TACAAGTACGTGATCCGCAACGTGGCGCGCAGCCGCGGCAAGACCGTGACCTTCATGCCCAAGCCCCTCTTCGAGGACAA
CGGGTCCGGCATGCACACCCACCAGAGCCTGTGGAAGGACGGCGAGCCGCTCTTCTACAGCCCGAACGGGTACGGCGGCC
TGTCCGACACCGCGCGCTACTACATCGGCGGCCTGCTGCACCACGCGCCGGCCCTGCTCGCGTTCACCAACCCGACCACG
AACTCCTACCGGCGGCTCGTGCCCGGCTACGAGGCCCCGGTGAACCTCGTCTACTCGGCGCGCAACCGCTCGGCGTGCTG
CCGGATTCCGCTCGGCGGCGACTCGCCGAAGGCGAAGCGGGTCGAGTTCCGGGTGCCGGACCCGAGCTGCAACCCGTACC
TGGCGTTCGCCGCGATGCTGATGGCCGGCCTGGACGGCGTGAAGAACAAGATCGACCCGCCGGACCCGATCGACAAGGAC
CTCTACGAGCTCCCGCCGGACGAGCTCGCCGCCGTTCCGCAGGTGCCCGGCTCACTCGAGAAGGTCCTCGACGCCCTCGA
GGCCGACAACGAGTTCCTCCGTGAAGGAAACGTCTTCACCCCCGACCTCATCGAGACCTGGATCGACTACAAGCGGGTGA
ACGAGGTCGACGCCATCCGGCTGCGCCCGCACCCGTACGAGTTCAGCCTCTACTACGACATCTAG

Protein sequence : 
MFTNADDVLRYIRDEGVQFIDVRFCDLPGVMQHFTIPTEVFSESVFSDGLMFDGSSIRGFQAIHESDMLLLPDPRTAFVD
PFREHPTLAMTFFIHDPITKEQYSRDPRNIAKKAEAYLRGTGIADTAYFGPEAEFYIFDDVRYDYNPYGSMHAVDSVEAA
WNTARKEEGGNLGYKPRFKGGYFPVPPTDHFTDLRSEMTRVLFEVGITVEMQHHEVGTAGQAEIDIRYDTLLKTADNLML
YKYVIRNVARSRGKTVTFMPKPLFEDNGSGMHTHQSLWKDGEPLFYSPNGYGGLSDTARYYIGGLLHHAPALLAFTNPTT
NSYRRLVPGYEAPVNLVYSARNRSACCRIPLGGDSPKAKRVEFRVPDPSCNPYLAFAAMLMAGLDGVKNKIDPPDPIDKD
LYELPPDELAAVPQVPGSLEKVLDALEADNEFLREGNVFTPDLIETWIDYKRVNEVDAIRLRPHPYEFSLYYDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 3e-85 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Franean1_1770 YP_001506114.1 glutamine synthetase, type I VFG1399 Protein 1e-151 67