Gene Information

Name : Franean1_1654 (Franean1_1654)
Accession : YP_001505998.1
Strain : Frankia sp. EAN1.pec
Genome accession: NC_009921
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1975222 - 1976019 bp
Length : 798 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ABC transporter, ATP-binding protein; K02003

DNA sequence : 
ATGCCCGCGCCCCCAGCCATCGCCATCCACGACATCACCAAGAGATACGACGGTGCCGCGTCGGCGCTGGCCGGGCTCTC
GCTCACCGTGGCACCCGGCGAATCGCTGGCAATCGTCGGGCCGTCCGGCAGTGGCAAGTCGACGCTGCTCAACATGGTGG
CCGGGCTGGACCGGCCGAGTACCGGCAGTGTCACGGTCGACGGCGTGCGGGTCGACCGGCTGAACGAGACCGCCGCGGCG
AAGTTCCGTCGTGCGCGGATCGGAATGATCTTCCAGTTTTTCAACCTGTTGGATGACCTGACGGTCCTCGACAACGTGCT
GCTGCCCGCCCAGCTCGCCGGCACACCGTCGGCCCGGGCACGCGCCCGGGCCGACGAGCTGCTCGGCTACCTCGGTGTGG
CCAGGCACGGCGGCGCCTACCCGGGACGGCTGTCCGGCGGCGAGCGCCAGCGGGTCGCCGTCGCCCGCGCACTGATGAAC
CGGCCCGCGCTTCTCCTCGCGGACGAGCCGACCGGTGCGCTGGACAGCGTCGCCGCCGCCCAGGTTCGGGACCTGCTGGC
CGCGGTCAATGCCGACGGGCAGACGCTTCTCCTGGTCACCCACGATGCGGCGCTCGCCGCCTCGTGCGCGAGCCGCACCG
TCGAGCTGGCGGACGGGACCGTCGCCCGGGACACCCACGGGTCCGTCGCCCGGGACGCTGAGACGACAGCAGCCTGCGGC
ACCGACGGGTCCGCCGTCGGCGGGATCGGCGGGACCGGCGGGACCGTGACCGGTGGCCCGGCGCCGGTGTCCCGATGA

Protein sequence : 
MPAPPAIAIHDITKRYDGAASALAGLSLTVAPGESLAIVGPSGSGKSTLLNMVAGLDRPSTGSVTVDGVRVDRLNETAAA
KFRRARIGMIFQFFNLLDDLTVLDNVLLPAQLAGTPSARARARADELLGYLGVARHGGAYPGRLSGGERQRVAVARALMN
RPALLLADEPTGALDSVAAAQVRDLLAAVNADGQTLLLVTHDAALAASCASRTVELADGTVARDTHGSVARDAETTAACG
TDGSAVGGIGGTGGTVTGGPAPVSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-21 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-21 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-21 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Franean1_1654 YP_001505998.1 ABC transporter-like protein NC_008702.1.4606598. Protein 5e-25 47
Franean1_1654 YP_001505998.1 ABC transporter-like protein NC_012469.1.7686878. Protein 4e-29 43
Franean1_1654 YP_001505998.1 ABC transporter-like protein CP001581.1.gene598.p Protein 1e-24 42
Franean1_1654 YP_001505998.1 ABC transporter-like protein CP001581.1.gene798.p Protein 1e-26 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Franean1_1654 YP_001505998.1 ABC transporter-like protein VFG2059 Protein 3e-09 41