Gene Information

Name : Franean1_1407 (Franean1_1407)
Accession : YP_001505757.1
Strain : Frankia sp. EAN1.pec
Genome accession: NC_009921
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1703903 - 1704673 bp
Length : 771 bp
Strand : -
Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mkm:Mkms_3784 short-chain dehydrogenase/reductase SDR

DNA sequence :
GTGTCTACAAACACCTCTGAGCAGCGGGCACGGCGGGTGGCCGTGGTGACGGGCGGCGCCTCGGGCATCGGACGTTCGGT
CTGTGAGCAGCTCGCGGCCGCCGGGCACCGCGTCGCGGTACTCGACCTGGACGGCGAGGCGGCACACGCGGTGGCCGGTG
AGCTGGGTGCCGGCGGCGCTGATGCCGTGGCCTGTCAGGTCGACGTGGCCGACCGGGAGTCTGTCGACACGGCGGTCGGA
AAGGTCCGTAGCGAGCTGGGGCCCGTGGACATCCTGGTCACGAGCGCGGGCAAGGCGGCGTTCGAGCCGTTCCTGGACAT
CACCCTCGAGGCGTGGAACAACATCCTCGCGGTCAACCTGACCGGCACGTTCCACTGTGTCCAGGCGGCGATCACCGACA
TGGTCGAAGCCCGGTGGGGCCGGATCGTGACGATCTCCTCGTCGAGCGCGCAGCGCGGGTCGCCCCGGATGGCGCACTAC
GCCGCGTCCAAGGGCGGAGTCATCACACTGACGAAGTCGCTGGCCCGCGAGTTCGCGCCGTTCGGGATCACCGCCAACAC
GATCCCGCCGTCCACCATCGACACCCCGATGGCACGCCAGTCCCAGTCTGTCGGTGACCTGCCCGGCGCCGAGGTCATGA
TTAAGGCGATTCCCCTGGGGCGGCTGGGAACAGGTGACGACATCGCCGCTGCCTGCGCCTTTCTCTGCTCCGACGGAGCC
GGTTACATCACCGGTCAGGTGCTCGGCGTGAACGGTGGGTCGGTCATCTGA

Protein sequence :
MSTNTSEQRARRVAVVTGGASGIGRSVCEQLAAAGHRVAVLDLDGEAAHAVAGELGAGGADAVACQVDVADRESVDTAVG
KVRSELGPVDILVTSAGKAAFEPFLDITLEAWNNILAVNLTGTFHCVQAAITDMVEARWGRIVTISSSSAQRGSPRMAHY
AASKGGVITLTKSLAREFAPFGITANTIPPSTIDTPMARQSQSVGDLPGAEVMIKAIPLGRLGTGDDIAAACAFLCSDGA
GYITGQVLGVNGGSVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 1e-26 41
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 1e-26 41