Gene Information

Name : Spea_4175 (Spea_4175)
Accession : YP_001504020.1
Strain : Shewanella pealeana ATCC 700345
Genome accession: NC_009901
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 5070083 - 5070796 bp
Length : 714 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sde:Sde_0308 ABC transporter ATP-binding protein

DNA sequence : 
ATGTTTATGAATAACTGTGTAATCAGTCTGACCGATTTAAATAAATCGTTTATTAATGGCGCTGGCAGCAATCATGTTTT
GAAGCAGGTGAATTTTTCGGTATATAGCGGCGAGATGGTCGCTATTTTAGGTCAGTCTGGCAGCGGGAAGTCGACCTTGT
TATCCATAATGGGCTTACTAGATACGGCTGATTCGGGTCACTATCATCTTTGTGGACAGGACGTAAGCAGCTTCTCTGCT
TACCAAATGAGTCAACTTCGAAACAGTCATATTGGTTGGGTATTTCAGAATTTTAATTTGATTGCCGATATGACGGTTGC
CGAGAATTTATCGGTTCCATTGCGTTTTAACTCATCAATTAAGCAAGCGGACTATGAGGCAAAGATTAACCAAGTATTAG
ATGAAGTGGGTCTAAGAGAGAAAACCGCTTTTTACCCAGCAGAACTTTCCGGTGGACAGCAGCAGAGGGTGGCAATTGCC
AGAGCGCTAATCTGTCAACCTGACATTATTTTATGTGATGAGCCAACAGGAAACTTAGACTCGAGTAATTCAAATAACGT
GATGGAGTTACTGAGTACTTTGCACCAAGAGGGTAAGACGGTACTGATTATTACCCATGATCCAGCCGTCGCAGCCTATT
GCCAAAAAGCGTACAAAATTCATGATGGAGAAATTGCCGCAGTTTCGCCTCTGGAGTTTAAACATGCTGTTTGA

Protein sequence : 
MFMNNCVISLTDLNKSFINGAGSNHVLKQVNFSVYSGEMVAILGQSGSGKSTLLSIMGLLDTADSGHYHLCGQDVSSFSA
YQMSQLRNSHIGWVFQNFNLIADMTVAENLSVPLRFNSSIKQADYEAKINQVLDEVGLREKTAFYPAELSGGQQQRVAIA
RALICQPDIILCDEPTGNLDSSNSNNVMELLSTLHQEGKTVLIITHDPAVAAYCQKAYKIHDGEIAAVSPLEFKHAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spea_4175 YP_001504020.1 ABC transporter-like protein NC_012469.1.7686878. Protein 7e-47 46
Spea_4175 YP_001504020.1 ABC transporter-like protein NC_008702.1.4606598. Protein 1e-42 45