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Name : Spea_4015 (Spea_4015) Accession : YP_001503860.1 Strain : Shewanella pealeana ATCC 700345 Genome accession: NC_009901 Putative virulence/resistance : Unknown Product : RNA-binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 4876362 - 4878773 bp Length : 2412 bp Strand : - Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: slo:Shew_3634 RNA binding S1 domain protein DNA sequence : ATGCCATGGGCTGTGGTATCTTTGGCAAAATCCCCTTTATCAACTAGGCTCGACCTCTATCTTATGCAAAATATTGCACA GCTCATCGCTGAAGAACTGAACGTTCGTCAGCAACAAGTTATCGATACCATTTCATTACTCGACGATGGCGCAACAGTGC CGTTTATCGCACGTTACCGTAAAGAAGCCACTGGTGGCTTAGATGATGCGCAATTGCGTACTCTATACAGCCGTTTAGGT TATCTACGTGATCTGAATGATCGTCGTAACGTGATTTTATCGAGCATCGAAGCCCAGAGTAAGTTAACACCTGAGTTGCA AGCGGCAATCAATGCAGCAGATAGTAAGACGCGTCTAGAAGATCTCTATTTACCTTACAAGCCAAAACGCCGTACCAAGG GCCTTATCGCCATTGAAGCGGGGATCGAGCCTTTGGCTGACTACCTGTTGGCAAACCGACAGGTAGATTGCGAAGCGGTT GCTAGCGAATATATCAATGCCGAGGCCGGCTTTGCCGATGCTAAGGCGGTACTCGATGGTGCACGCTTTATCTTGATGGA GCGTTTTGCTGAAGATGCCGAATTACTGCAAAAAATTCGCGTACAAGTAGAACAAAATGCTGTGTTTGAAAGCCGCATGG TTAAAGGTAAAGAGAAAGAGGGCGCTAAGTTTAGAGATTACTTCGAGCACTCTGAAAAGCTGACTAAAGTGCCATCTCAC CGTGCACTTGCCATGCTACGCGGACGTAATGAAGGCATGTTAAGCCTCAATATCAATGCCGATCCGCATCAAGAGCCTAA GCAAGCTAGTTACTGTGAAGTGATTATTATCGAGCACTTTAAGTTAGGCTTAACAGATAGCGCCGTTGATACATGGTTAA AGACCGTTGTTGCGGCAACGTGGAAAGTTAAAATCGCCCTGCAAATGGAAACTGAGTTTCTTGGTCGCATGCGTGATACC GCTGAGCAAGAAGCAATTAAGGTTTTTGCCCGCAACTTAGGCGATCTATTGATGGCAGCTCCTGCCGGTGCTAAAGCGAC CCTAGGTTTAGATCCGGGTCTTCGCTCAGGTGTGAAAGTCGCTATCGTCAACGACACCGGCAAGTTGATGGCACACACGA CTATCTTCCCGCATGCCCCACAAAACCAGTGGGATAAGTCGGTAAGAACCTTAGCTAACCTTGTGAAGATGCATAAGGTT GAGTTGATTGCTATCGGTAACGGTACAGCCTCACGTGAAACCGATAAACTAGCTGCCGATCTGATCAGCCAAGTAAAGGC TGAGCTACCTAGACTGACTAAGATTATGGTCAGCGAAGCGGGCGCTTCAGTGTATTCAGCATCTGAGCTAGCCTCGGAAG AGTTCCCGAATATCGATGTTTCGATCCGCGGCGCGGTATCGATTGCTCGTCGTCTGCAAGATCCATTAGCCGAGCTAGTG AAGATTGAGCCAAAGGCGATTGGTGTGGGTCAGTATCAACACGATGTAAGCCAGAGTCAGTTATCAAGCTCGCTAGAAGC GGTTGTCGAAGACTGTGTGAATGGCGTAGGCGTAGATGTGAATATGGCATCTGCTGCGTTGCTGGCTCAGGTTGCGGGTC TTAATAAAACCTTGGCACGTAACATTGTGACCCATCGTGACGAGCAAGGCCGTTTCAACAACCGTAAAGCGCTGCTTAAA GTGGCACGCCTTGGGCCTAAAGCCTATGAGCAGGCAGCGGGCTTCTTACGTATTAGTGAAGGGGATAACCCACTCGACGG CTCTTCGGTGCATCCAGAGGCCTACTCATTAGTTGAGTCGATTGCAGCGGCTAAAGGTGTGTCGGTTGCCGAGCTAATCG GTAACTCAGAGCTACTTAAGGCGCTAGAAGCCAAAGATTTTATCACCAGTGAATTTGGTCTGCCCACAGTGACAGATATT CTCGCCGAGCTGGATAAGCCGGGACGCGATCCTCGTGGTGAATTTAAAACCGCCACTTTTAAAGAGGGCGTTGAAGAGAT CAAAGACCTTAAACTGGATATGATCTTAGAAGGTGTGGTAACTAACGTGACTAACTTCGGTGCTTTCGTCGATGTGGGCG TGCATCAAGATGGTTTAGTCCATATCTCATCGATGACCGACAAGTTTATTGACGATCCGCACAAGGTGGTTAAAGCCGGT GATATCGTTAAAGTTAAGGTCATGGAAGTTGATGCAGAACGTCGCCGTATCGGCCTAAGTATGCGCCTCGATGATAAGGC TGGCGATGCACCTAAGAGTGCGCCGCGTCCAGCAAACCACCAAAACAAAGGTGCCCCTAATAAAGGCGCTAATCAGCAGC GTGGCCAGCAAAAGACTCACAAACCTAAGCAGCAGGCTAATGCCGCTATGGGTAATGCCTTTGCCGATGCGTTCGCTAAA CTGAAGAAGTAA Protein sequence : MPWAVVSLAKSPLSTRLDLYLMQNIAQLIAEELNVRQQQVIDTISLLDDGATVPFIARYRKEATGGLDDAQLRTLYSRLG YLRDLNDRRNVILSSIEAQSKLTPELQAAINAADSKTRLEDLYLPYKPKRRTKGLIAIEAGIEPLADYLLANRQVDCEAV ASEYINAEAGFADAKAVLDGARFILMERFAEDAELLQKIRVQVEQNAVFESRMVKGKEKEGAKFRDYFEHSEKLTKVPSH RALAMLRGRNEGMLSLNINADPHQEPKQASYCEVIIIEHFKLGLTDSAVDTWLKTVVAATWKVKIALQMETEFLGRMRDT AEQEAIKVFARNLGDLLMAAPAGAKATLGLDPGLRSGVKVAIVNDTGKLMAHTTIFPHAPQNQWDKSVRTLANLVKMHKV ELIAIGNGTASRETDKLAADLISQVKAELPRLTKIMVSEAGASVYSASELASEEFPNIDVSIRGAVSIARRLQDPLAELV KIEPKAIGVGQYQHDVSQSQLSSSLEAVVEDCVNGVGVDVNMASAALLAQVAGLNKTLARNIVTHRDEQGRFNNRKALLK VARLGPKAYEQAAGFLRISEGDNPLDGSSVHPEAYSLVESIAAAKGVSVAELIGNSELLKALEAKDFITSEFGLPTVTDI LAELDKPGRDPRGEFKTATFKEGVEEIKDLKLDMILEGVVTNVTNFGAFVDVGVHQDGLVHISSMTDKFIDDPHKVVKAG DIVKVKVMEVDAERRRIGLSMRLDDKAGDAPKSAPRPANHQNKGAPNKGANQQRGQQKTHKPKQQANAAMGNAFADAFAK LKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 60 |
