Gene Information

Name : Spea_3942 (Spea_3942)
Accession : YP_001503787.1
Strain : Shewanella pealeana ATCC 700345
Genome accession: NC_009901
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 4791974 - 4793494 bp
Length : 1521 bp
Strand : +
Note : PFAM: aldehyde dehydrogenase; KEGG: shm:Shewmr7_3772 aldehyde dehydrogenase (NAD(+))

DNA sequence :
ATGATTTATAACAAGCCAGGAACAGCCGGCGCGATTATTAATTTCAAATCTCAATACCAAAATTTCATTGGTGGCGAGTG
GGTTAAGCCCGTTAATAACCTTTACTTTGACAACACCTCCCCCGTAGATGGGCAAGTGTTCTGCCAGGTGCCGCGCTCAG
GCTCTGTTGATATTGAAATGGCACTCGATGCAGCCCACGAAGCAAAAGAAAGTTGGGGCAAGACTTCTGTCACCGAACGT
GCAAACATCTTGCTGCGCATTGCCGATCGCATCGAACAGAATATCGAGTCGCTAGCTGTTGCCGAGACTTGGGATAATGG
CAAGGCGGTACGCGAAACCTTAGCCGCCGACTTACCGTTAGTTGTTGACCACTTCCGCTATTTTGCCGGCTGTATTCGTG
CCCAAGAGGGCAGCGCCGCCGACATCGACGCCAACACTGTTAGTTACCACTTCCCCGAGCCACTGGGCGTAGTGGGTCAG
ATCATCCCGTGGAACTTCCCTTTGCTAATGGCAGCCTGGAAAATTGCCCCTGCACTGGCCGCCGGTAACTGCGTGGTGCT
TAAACCTGCCGAGCAGACGCCAGTGTCTATTCTGGTGATGCTTGAGCTTATCGAAGATTTACTGCCAAAAGGCGTGCTCA
ATGTGGTTAACGGTTTCGGCGCCGAAGCGGGTCAAGCACTCGCCACCAGCAAGCGTATCGCCAAGCTGGCCTTTACCGGC
TCAACTGAAGTGGGTCACCATATATTAAAGTGCGCCGCAGAATCCCTAATCCCATCCACCGTCGAGCTTGGCGGTAAGTC
ACCTAATGTTTACTTTGCCGATGTGATGGATCATGAAGATGAATATCTCGATAAGGCGGTTGAGGGCATGCTACTGGCCT
TCTTCAATCAGGGCGAAGTCTGTACCTGTCCGTCACGGGCATTGATCCACGAGTCTATTTACGACAAGTTCATTGCTAAG
GTGATTGAGCGCAGTAAAACCATTAAACAAAGTAACCCACTGGATACCGACACCCAAGTAGGTGCACAGGCCTCGCAGGA
GCAGTTCGATAAGATCTTAAGTTACCTGCAGATAGGTAAAGATGAGGGCGCAGAGGTGCTGATTGGCGGTGATCTATGTA
AGCTTGAAGGTGAACAAAGCCAAGGGTTTTACATTACACCGACCATCTTAAAGGGCACCAACGATATGCGCATCTTCCAA
GAGGAGATCTTCGGCCCAGTGATCTCGGTGACCACCTTTAAAAATGAAGCCGAAGCCTTAGCGATTGCCAACGATACCGA
ATACGGTTTAGGCGCCGGAGTATGGACTCGCGATATGAATACCGCCCAGCGCATGGGGCGTGGCATTCAGGCGGGTCGAG
TTTGGATTAACTGCTACCACGCCTACCCGGCTCACGCCGCATTTGGTGGCTATAAGAAGTCGGGCATTGGCCGTGAAACC
CACAAGATGATGTTAGATCATTATCAAAATACCAAGAACCTACTGATCAGCTACGATGCTAATCCATTAGGCTTCTTCTA
A

Protein sequence :
MIYNKPGTAGAIINFKSQYQNFIGGEWVKPVNNLYFDNTSPVDGQVFCQVPRSGSVDIEMALDAAHEAKESWGKTSVTER
ANILLRIADRIEQNIESLAVAETWDNGKAVRETLAADLPLVVDHFRYFAGCIRAQEGSAADIDANTVSYHFPEPLGVVGQ
IIPWNFPLLMAAWKIAPALAAGNCVVLKPAEQTPVSILVMLELIEDLLPKGVLNVVNGFGAEAGQALATSKRIAKLAFTG
STEVGHHILKCAAESLIPSTVELGGKSPNVYFADVMDHEDEYLDKAVEGMLLAFFNQGEVCTCPSRALIHESIYDKFIAK
VIERSKTIKQSNPLDTDTQVGAQASQEQFDKILSYLQIGKDEGAEVLIGGDLCKLEGEQSQGFYITPTILKGTNDMRIFQ
EEIFGPVISVTTFKNEAEALAIANDTEYGLGAGVWTRDMNTAQRMGRGIQAGRVWINCYHAYPAHAAFGGYKKSGIGRET
HKMMLDHYQNTKNLLISYDANPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-177 73
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 0.0 71
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 0.0 71
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 0.0 71
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 0.0 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spea_3942 YP_001503787.1 aldehyde dehydrogenase VFG0082 Protein 2e-177 73