Gene Information

Name : glnA (Spea_3916)
Accession : YP_001503761.1
Strain : Shewanella pealeana ATCC 700345
Genome accession: NC_009901
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 4764725 - 4766134 bp
Length : 1410 bp
Strand : +
Note : forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltra

DNA sequence :
ATGTCAGCAGAATCAGTTTTACAACAACTAAAAGAATTAGAAGTTAAATTTGTTGATTTGCGTTTTACCGATACGATAGG
TAAAGAGCAACACGTTACAATCCCAACTCACCAAGTAGATGCTGATTTCTTCGAAGACGGTAAAATGTTTGACGGTTCTT
CAATCCAAGGTTGGAAAGGTATTAATGAATCAGACATGGTATTGATGCCTGATCCTGCAAGCTTTGTACTTGACCCTTTC
ACTGCAGAAACAACTGCAAACATCCGTTGTGACATTCTAAACCCAGGCACTATGACAGGTTACAACCGTGACCCACGCTC
TATCGCTAAGAAAGCTGAAGATTACCTACGTTCTACAGGTATCGCTGACACAGTATTGGTTGGTCCAGAGCCAGAATTTT
TCCTATTTGACGACGTTAAGTTCGGCGCTGACATGTCTGGTTGTTTCTACAAGGTTGATGCTGAAGAAGCGGCTTGGAAC
TCAGGCACTAGCTACGAAGGTGGCAACAAAGGTCACCGTCCAGGCGTTAAAGGTGGTTACTTCCCAGTAGCACCAGTTGA
CTCTTCACAAGACATCCGTAGTGCTATGTGTTTAGTACTAGAAGAGATGGGCCAAGTTGTTGAAGCGCATCACCACGAAG
TGGCGACTGCTGGTCAGAACGAAATCGCAACTCGTTTCAACACGCTAACCCTTAAGGCCGACGAAGTTCAGGTACTTAAG
TATGTAGTACATAACGTTGCTCACGCTTACAACAAGACTGCGACATTTATGCCTAAGCCAATCGTTGGTGACAACGGTAG
CGGTATGCACGTGCATCAGTCTCTTGCCAAAGATGGCGTAAACTTATTCGCGGGTGACAAGTACGGCGGATTGAGCGAAA
CAGCTCTATTCTACATCGGTGGTGTGATTAAGCATGCTCGTGCAATTAACGCATTTGCTAACCCATCGACAAACTCATAC
AAGCGTCTTGTACCACACTTTGAAGCACCAGTGATGCTTGCATACTCTGCAGCTAACCGCTCTGCTTCTATCCGTATCCC
AGTGGTACCAAGTGCAAAAGGTCGTCGTATCGAAATCCGTTTTGGTGACCCAGTAGCTAACCCATACCTAGCGTTCTCTG
CAATGCTAATGGCTGGTCTTGACGGTATCCAAAACAAGATCCACCCAGGTGAAGCGATGGATAAAGATCTATACGATCTT
CCTGCTGAAGAAGCGGCTGAAATCCCAACTGTTGCCACTTCACTAGAAAACGCACTTGAGTGTCTAGACGCAGACCGTGA
GTTCCTGACTCGTGGCGACGTATTCACTAACGACTTTATCGATTCTTACATCAAACTAAAGTCTGCAGACGTTGAGCGTA
TCAACCAAACAACTCACCCAGTTGAATTCGAGCTTTACTACAGCTTGTAA

Protein sequence :
MSAESVLQQLKELEVKFVDLRFTDTIGKEQHVTIPTHQVDADFFEDGKMFDGSSIQGWKGINESDMVLMPDPASFVLDPF
TAETTANIRCDILNPGTMTGYNRDPRSIAKKAEDYLRSTGIADTVLVGPEPEFFLFDDVKFGADMSGCFYKVDAEEAAWN
SGTSYEGGNKGHRPGVKGGYFPVAPVDSSQDIRSAMCLVLEEMGQVVEAHHHEVATAGQNEIATRFNTLTLKADEVQVLK
YVVHNVAHAYNKTATFMPKPIVGDNGSGMHVHQSLAKDGVNLFAGDKYGGLSETALFYIGGVIKHARAINAFANPSTNSY
KRLVPHFEAPVMLAYSAANRSASIRIPVVPSAKGRRIEIRFGDPVANPYLAFSAMLMAGLDGIQNKIHPGEAMDKDLYDL
PAEEAAEIPTVATSLENALECLDADREFLTRGDVFTNDFIDSYIKLKSADVERINQTTHPVEFELYYSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-100 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_001503761.1 glutamine synthetase VFG1399 Protein 6e-108 51