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Name : rph (Spea_3844) Accession : YP_001503689.1 Strain : Shewanella pealeana ATCC 700345 Genome accession: NC_009901 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 4671555 - 4672268 bp Length : 714 bp Strand : - Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGCGTCCAAGCAACAGAACTCCAGCACAGTCTCGCCCTGTGACTATCACTCGTCAGTTTACTGCTCACGCCGAAGGTTC GGTATTAGTTGAGTTCGGTGACACTAAAGTACTGTGTACCGCTAGTTTTGAAGAAGGCGTACCGCGTTTCCTTAAGGGCC AAGGCCAAGGTTGGGTAACTGCTGAATATGGCATGTTGCCACGTTCTACTCATAGCCGTATGCAGCGTGAAGCCGCTCGC GGTAAGCAGTCTGGTCGTACTCAAGAAATTCAACGTCTAATTGGTCGCTCACTACGCGCTGCGGTAGACATGAAGCTTCT AGGTGAAAACACTATCGTTATCGATTGTGACGTGATTCAGGCCGATGGTGGTACTCGTACCGCTGCTATCACTGGTGCAT GTGTTGCATTAGTTGACGCGCTTAACTGGGCTCGTGGTAAAGGCATCTTGAAGACTAACCCACTTAAGTTCCTTATTGCT GCGGTAAGTGTTGGTATTTATAAAGGCGAGCCAATCTGCGATCTAGAATATATCGAAGATAGCGCTGCTGAAACTGACAT GAACGTGGTAATGACTGAAACCGGTAAGATCATCGAGATCCAGGGTACTGCAGAAGGTGAGCCATTTAGCCACGAAGAGC TATTGAGCCTACTTGATTTGGCTAAGCACGGTATTCGCGAAATCGTAGATATCCAGAAAGCGTCATTGAGCTAA Protein sequence : MRPSNRTPAQSRPVTITRQFTAHAEGSVLVEFGDTKVLCTASFEEGVPRFLKGQGQGWVTAEYGMLPRSTHSRMQREAAR GKQSGRTQEIQRLIGRSLRAAVDMKLLGENTIVIDCDVIQADGGTRTAAITGACVALVDALNWARGKGILKTNPLKFLIA AVSVGIYKGEPICDLEYIEDSAAETDMNVVMTETGKIIEIQGTAEGEPFSHEELLSLLDLAKHGIREIVDIQKASLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 1e-63 | 58 |
