Gene Information

Name : Spea_3381 (Spea_3381)
Accession : YP_001503230.1
Strain : Shewanella pealeana ATCC 700345
Genome accession: NC_009901
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 4129167 - 4130222 bp
Length : 1056 bp
Strand : -
Note : PFAM: transport system permease protein; KEGG: slo:Shew_0713 transport system permease protein

DNA sequence :
ATGAGTAAGCCTTCAGCTCGCCAAGTCGGCGCAGTATTGAGTCAGCGGCGTCCTATCGAGTACCTAGTATTTTCCTTGTT
GCTCTTTATAACTTTGCTTACCCCTTTTGCGGCGACAAGTTTTGGCGCTGCAACAGTTAGTGCCGTTGATGTTTTTAATG
TGCTGGCTTATAAGCTGCTGAATCTTGGTGAGTCACTGGGGGTTAGAGAGCGGATTATTTGGGAGCTGCGTTTACCGCGA
GTGTTACTGGCCTTTATCGCCGGAGCAGGGCTCTCGATTGCTGGTAGTGTGTTGCAAACAGTGACTCGAAATCCGCTAGC
AGACCCTTATCTGTTTGGGATCTCATCCGGCGCCTCTTTCGGCGCTGTAGTGGCGTTAACCCTATTTAGCCAAAGTATGC
TTTGGTTAAGCCTGCCCGTAGGAGCCTTTATTGGCGCTAGCTTGTCGGTGGTGATGGTGCTGAGCCTGTGCGGCCGCAAC
TTAAGTACCCAGGTTGAACGTATGTTGCTCTCCGGCGTGGCTATCTCGTTTATGTTTGGCGCGATGGCAAGCCTGATGCT
GTATTTCTCTAGCCCACAAGCTGCGGCCTCTGTGCTGTTTTGGACCTTAGGCAGTTTTGCCAAAGCCAGCTGGCAAGGCC
TATGGTTGCCAGCCGGAAGCGTTATCTTATCTACCCTAATCATCTTACTTAATAAGCGCCAGATTGTGGCCATGCGTGCG
GGCGATGAAACCGCCCATACCCTAGGGATTAATGTCGGCCACTTGCGTCTCAATATGTTGCTTCTGTGCTCGCTTATCAC
CGCGATACTGGTCGCAAATTGTGGCGGTATCGGCTTTATCGGCTTAATGGTGCCCCATACGGTGCGTTTACTGTTTCCGG
GACGCTACCCCCTGTTATTAACGGCGCTGGTGGGAGGGCTATTTATGGTTTGGGTCGATGTATTAGCCCGAACATTATTG
AGTTATCAAGAATTGCCTGTGGGGATCATTACCTCGGTGATGGGCAGTATTTTCTTTCTATTTATTTTAGGCAGTCGCAG
CGGTAAACGTATTTAG

Protein sequence :
MSKPSARQVGAVLSQRRPIEYLVFSLLLFITLLTPFAATSFGAATVSAVDVFNVLAYKLLNLGESLGVRERIIWELRLPR
VLLAFIAGAGLSIAGSVLQTVTRNPLADPYLFGISSGASFGAVVALTLFSQSMLWLSLPVGAFIGASLSVVMVLSLCGRN
LSTQVERMLLSGVAISFMFGAMASLMLYFSSPQAAASVLFWTLGSFAKASWQGLWLPAGSVILSTLIILLNKRQIVAMRA
GDETAHTLGINVGHLRLNMLLLCSLITAILVANCGGIGFIGLMVPHTVRLLFPGRYPLLLTALVGGLFMVWVDVLARTLL
SYQELPVGIITSVMGSIFFLFILGSRSGKRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1907 YP_005684260.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 2e-35 41
cpfrc_01919 YP_003784319.1 hypothetical protein Not tested PiCp 7 Protein 2e-35 41
CpI19_1928 YP_005686352.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 2e-35 41
Cp1002_1913 YP_005682168.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 2e-35 41