Gene Information

Name : Spea_3364 (Spea_3364)
Accession : YP_001503213.1
Strain : Shewanella pealeana ATCC 700345
Genome accession: NC_009901
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4108324 - 4109055 bp
Length : 732 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbm:Shew185_0998 ABC transporter related

DNA sequence :
ATGTTATCGATGAACAACATCAGCAAAGTATTTAAAACGGATTTAGTGGAAACTCATGCATTACGAGACTTTAACTTAGA
GGTCAAGGAAGGCGAGTTTGTTGCAGTTACCGGGCCTTCTGGTTCGGGTAAAACCACCTTCTTGAACATTGCTGGCTTAC
TCGAAGGTTTTACCCATGGTGACTATTTTCTCGATGGTGTGAATATTTCAAATCTGAGTGACAACAAGAGTGCAGCGATT
CGAAACGAGAAGATTGGCTTTATCTTTCAAGGCTTCAATCTTATCTCTGATCTAAATTTGGCCGAGAACGTCGAGGTCCC
GCTGCGTTACCGCGGTTTTAATGCTAAGGAGCGAAAAATCCGGGTCGAACGTGCGCTAGAGCAGGTGGGACTCGCCTCGA
GAATGAAGCATTTTCCCACGCAGCTCTCAGGTGGGCAGCAGCAGCGAGTGGCGATAGCTAGAGCGTTAGCGGGTGAGCCA
AGGTTTTTACTCGCCGATGAGCCGACTGGTAATCTCGATAGTTTAATGGCGCGCCAAGTGATGGAGCTACTTGAAGATAT
TAACAAGGCTGGCACCACGATTATCATGGTAACTCACGATGCGGAGTTGGCTCGTCGTGCTCAGCGTAATATTCAGATTG
TCGATGGTCATGTGTGTGATTTCACCATGTATCAAGCAGGCACCGGTCAAGGTAAAGCTGAGGCGGTAGCCAAGACAGCT
TCAGTTGCTTAA

Protein sequence :
MLSMNNISKVFKTDLVETHALRDFNLEVKEGEFVAVTGPSGSGKTTFLNIAGLLEGFTHGDYFLDGVNISNLSDNKSAAI
RNEKIGFIFQGFNLISDLNLAENVEVPLRYRGFNAKERKIRVERALEQVGLASRMKHFPTQLSGGQQQRVAIARALAGEP
RFLLADEPTGNLDSLMARQVMELLEDINKAGTTIIMVTHDAELARRAQRNIQIVDGHVCDFTMYQAGTGQGKAEAVAKTA
SVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-35 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-35 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spea_3364 YP_001503213.1 ABC transporter-like protein NC_008702.1.4606598. Protein 5e-45 50
Spea_3364 YP_001503213.1 ABC transporter-like protein NC_012469.1.7686878. Protein 3e-50 49
Spea_3364 YP_001503213.1 ABC transporter-like protein CP001581.1.gene798.p Protein 1e-36 44
Spea_3364 YP_001503213.1 ABC transporter-like protein NC_012469.1.7685735. Protein 5e-36 41